BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E13
(149 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ518577-1|ABF66619.1| 318|Anopheles gambiae putative secreted ... 21 3.9
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 21 3.9
AY330179-1|AAQ16285.1| 171|Anopheles gambiae odorant-binding pr... 21 5.2
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 20 9.1
>DQ518577-1|ABF66619.1| 318|Anopheles gambiae putative secreted
carbonic anhydrase protein.
Length = 318
Score = 21.4 bits (43), Expect = 3.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 130 GP*TLHSQGSSLSL 89
GP T+H+ G S+SL
Sbjct: 86 GPMTIHNNGHSVSL 99
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 21.4 bits (43), Expect = 3.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 148 TGTESSGP*TLHSQGSSLS 92
+G SSGP QGSS+S
Sbjct: 578 SGISSSGPVNRRVQGSSVS 596
>AY330179-1|AAQ16285.1| 171|Anopheles gambiae odorant-binding
protein AgamOBP53 protein.
Length = 171
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 33 NXGYQRFFVDSAYERCQV 86
N G+Q +FV + +CQ+
Sbjct: 56 NPGFQAYFVVNCLAQCQL 73
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 92 FTDLASFIRAVNKKSLISXISRG 24
F D AS +RA + + +SRG
Sbjct: 331 FDDSASVVRATHASRSATRMSRG 353
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,064
Number of Sequences: 2352
Number of extensions: 1384
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 29
effective length of database: 495,771
effective search space used: 9915420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -