Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_E12
         (306 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   0.85 
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    24   1.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   1.5  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   2.0  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   2.6  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   3.4  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    22   6.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    22   6.0  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 303  WCRLSSGKQSCSRSVQRVWNAYRAGVS 223
            W R+  G +  +  +QR W+  RA ++
Sbjct: 1056 WSRICEGAKRITAQLQRAWDEERAALA 1082


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +2

Query: 164 NRRQPCEE-WYASSTRSSRHSDTPARYAFQTL 256
           N R+P  E +Y    RSS +   PAR A  TL
Sbjct: 261 NYREPIVEGYYPKMIRSSNNRSYPARAANTTL 292


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 303  WCRLSSGKQSCSRSVQRVWNAYRA 232
            W R++   +  + ++QR WN  RA
Sbjct: 1017 WSRIAEAAKQITSALQRDWNEERA 1040


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 26  FVFFFLNNNGHLCPIQ 73
           F F F+N   H+CP+Q
Sbjct: 283 FRFRFINAASHVCPLQ 298


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 184 FTGLPSVVSGLKISL 140
           + GLPSV+SGL  SL
Sbjct: 454 YNGLPSVMSGLDESL 468


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/42 (23%), Positives = 22/42 (52%)
 Frame = +2

Query: 62  CPIQTCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEE 187
           CP Q  R LQ + +++   ++ E+     L+    ++QP ++
Sbjct: 427 CPSQRQRQLQQQQQQQQQQQQGERYVPPQLRQQRQQQQPQQQ 468


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 107 LSVTDLVKLDMFELGIGGH 51
           L V D +KL+  +L  GGH
Sbjct: 22  LGVKDRIKLEYIDLFKGGH 40


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -1

Query: 303  WCRLSSGKQSCSRSVQRVWNAYRAGVS 223
            W R+    +  + S+Q+ W+  RA ++
Sbjct: 993  WSRICEAAKRITASLQQAWDDERAALA 1019


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,108
Number of Sequences: 2352
Number of extensions: 5459
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19992474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)