Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E12
(306 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 33 0.12
X76556-1|CAA54056.1| 447|Homo sapiens CAB3b protein. 29 2.0
M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein. 29 2.0
M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein. 29 2.0
AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin va... 29 2.0
X76555-1|CAA54055.1| 484|Homo sapiens CAB3a protein. 29 2.7
U07139-1|AAA95958.1| 484|Homo sapiens voltage-gated calcium cha... 29 2.7
D43704-1|BAA07803.1| 484|Homo sapiens voltage-dependant calcium... 29 2.7
BC041811-1|AAH41811.1| 484|Homo sapiens calcium channel, voltag... 29 2.7
AF043380-1|AAC23559.1| 322|Homo sapiens epidermal filaggrin pro... 29 2.7
L27584-1|AAA19799.1| 482|Homo sapiens Ca channel B3 subunit pro... 28 6.1
M96943-1|AAA36487.1| 1218|Homo sapiens profilaggrin protein. 27 8.1
M60494-1|AAA63244.1| 990|Homo sapiens profilaggrin protein. 27 8.1
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTR--SSRHSDT 229
T + D SR +SG++ A + + D Q GD R + +ST+ SSRHS +
Sbjct: 3468 TSQGRSDASRGQSGSRSASRQTRNDEQSGDGSRHSWSHHHEASTQADSSRHSQS 3521
Score = 30.7 bits (66), Expect = 0.87
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTRS--SRHS 223
T + D SR +SG++ A + + + Q GD+ R + +ST + SRHS
Sbjct: 3144 TSQGRSDASRGQSGSRSASRTTRNEEQSGDSSRHSVSRHHEASTHADISRHS 3195
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTRS--SRHS 223
T + D SR +SG++ A + + + Q GD R + +ST + SRHS
Sbjct: 2820 TSQGRSDASRGQSGSRSASRTTRNEEQSGDGSRHSGSRHHEASTHADISRHS 2871
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTR--SSRHSDT 229
T + D S +SG++ A + + + Q GD R + +ST+ SSRHS +
Sbjct: 3792 TSQGRSDASHGQSGSRSASRETRNEEQSGDGSRHSGSRHHEASTQADSSRHSQS 3845
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWY--ASSTRSSRHS 223
T + D S +SG++ A + ++D Q GD R + AS SSRHS
Sbjct: 1199 TSQGRSDASHGQSGSRSASRQTRKDKQSGDGSRHSGSRHHEAASWADSSRHS 1250
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTR--SSRHS 223
T + D SR +SG++ + + + Q GD R + +S+R SSRHS
Sbjct: 1847 TSQERSDVSRGQSGSRSVSRQTRNEKQSGDGSRHSGSRHHEASSRADSSRHS 1898
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTR--SSRHS 223
T + D S +SG + A + + + Q GD R + STR SSRHS
Sbjct: 1523 TPQGRSDASHGQSGPRSASRQTRNEEQSGDGSRHSGSRHHEPSTRAGSSRHS 1574
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTR--SSRHS 223
T + D S +SG++ A + + + Q GD R + +S++ SSRHS
Sbjct: 550 TSQGRSDASHGQSGSRSASRQTRNEEQSGDGTRHSGSRHHEASSQADSSRHS 601
>X76556-1|CAA54056.1| 447|Homo sapiens CAB3b protein.
Length = 447
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 140 QRD-LQPGDNRRQPCEE-WYASSTRSSRHSDTPARYAFQTLWTDREQL 277
+RD L P D + + W SS RSSRH + A+Q L+ + QL
Sbjct: 396 ERDSLMPSDEASESSRQAWTGSSQRSSRHLEEDYADAYQDLYQPQCQL 443
>M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein.
Length = 1084
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTR--SSRHSDT 229
T + D S +SG++ A + + + Q GD R + +ST+ SSRHS +
Sbjct: 815 TSQGRSDASHGQSGSRSASRETRNEEQSGDGSRHSGSRHHEASTQADSSRHSQS 868
>M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein.
Length = 797
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTR--SSRHSDT 229
T + D S +SG++ A + + + Q GD R + +ST+ SSRHS +
Sbjct: 528 TSQGRSDASHGQSGSRSASRETRNEEQSGDGSRHSGSRHHEASTQADSSRHSQS 581
>AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin
variant protein.
Length = 583
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTRS--SRHS 223
T + D SR +SG++ A + + + Q GD R + +ST + SRHS
Sbjct: 336 TSQGRSDASRGQSGSRSASRTTRNEEQSGDGSRHSGSRHHEASTHADISRHS 387
>X76555-1|CAA54055.1| 484|Homo sapiens CAB3a protein.
Length = 484
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 140 QRD-LQPGDNRRQPCEE-WYASSTRSSRHSDTPARYAFQTLWTDREQ 274
+RD L P D + + W SS RSSRH + A+Q L+ Q
Sbjct: 396 ERDSLMPSDEASESSRQAWTGSSQRSSRHLEEDYADAYQDLYQPHRQ 442
>U07139-1|AAA95958.1| 484|Homo sapiens voltage-gated calcium
channel beta subunit protein.
Length = 484
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 140 QRD-LQPGDNRRQPCEE-WYASSTRSSRHSDTPARYAFQTLWTDREQ 274
+RD L P D + + W SS RSSRH + A+Q L+ Q
Sbjct: 396 ERDSLMPSDEASESSRQAWTGSSQRSSRHLEEDYADAYQDLYQPHRQ 442
>D43704-1|BAA07803.1| 484|Homo sapiens voltage-dependant calcium
channel beta3 subunit protein.
Length = 484
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 140 QRD-LQPGDNRRQPCEE-WYASSTRSSRHSDTPARYAFQTLWTDREQ 274
+RD L P D + + W SS RSSRH + A+Q L+ Q
Sbjct: 396 ERDSLMPSDEASESSRQAWTGSSQRSSRHLEEDYADAYQDLYQPHRQ 442
>BC041811-1|AAH41811.1| 484|Homo sapiens calcium channel,
voltage-dependent, beta 3 subunit protein.
Length = 484
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 140 QRD-LQPGDNRRQPCEE-WYASSTRSSRHSDTPARYAFQTLWTDREQ 274
+RD L P D + + W SS RSSRH + A+Q L+ Q
Sbjct: 396 ERDSLMPSDEASESSRQAWTGSSQRSSRHLEEDYADAYQDLYQPHRQ 442
>AF043380-1|AAC23559.1| 322|Homo sapiens epidermal filaggrin
protein.
Length = 322
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTR--SSRHS 223
T + D S +SG + A + + + Q GD R + +STR SSRHS
Sbjct: 82 TPQGRSDASHGQSGPRSASRQTRNEEQSGDGSRHSGSRHHEASTRAGSSRHS 133
>L27584-1|AAA19799.1| 482|Homo sapiens Ca channel B3 subunit
protein.
Length = 482
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 140 QRD-LQPGDNRRQPCEE-WYASSTRSSRHSDTPARYAFQTLWTDREQ 274
+RD L P D + + W SS R+SRH + A+Q L+ Q
Sbjct: 394 ERDSLMPSDEASESSRQAWTGSSQRTSRHLEEDYADAYQDLYQPHRQ 440
>M96943-1|AAA36487.1| 1218|Homo sapiens profilaggrin protein.
Length = 1218
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTR--SSRHS 223
T + D SR SG++ + + Q GD R +STR SSRHS
Sbjct: 550 TTQGRSDASRGSSGSRSTSRETRDQEQSGDGSRHSGSHHQEASTRAESSRHS 601
>M60494-1|AAA63244.1| 990|Homo sapiens profilaggrin protein.
Length = 990
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 74 TCRALQDRSRKESGAKRAEK*YQRDLQPGDNRRQPCEEWYASSTR--SSRHS 223
T + D SR SG++ + + Q GD R +STR SSRHS
Sbjct: 328 TTQGRSDASRGSSGSRSTSRETRDQEQSGDGSRHSGSHHQEASTRAESSRHS 379
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,297,993
Number of Sequences: 237096
Number of extensions: 785834
Number of successful extensions: 1846
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1846
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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