Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E11
(325 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 77 3e-15
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 67 3e-12
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 30 0.36
09_02_0289 - 6941154-6941399,6941630-6941722,6941801-6941884,694... 29 0.63
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241... 28 1.9
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549... 27 2.6
03_05_0836 - 28088832-28089422,28089626-28089831,28089985-28090330 27 2.6
02_04_0115 - 19888252-19888406,19888507-19888573,19888867-198891... 27 4.5
02_02_0370 + 9509212-9509293,9509905-9511721 27 4.5
01_07_0265 + 42404297-42404479,42404544-42404723,42404811-42405440 27 4.5
01_06_0888 + 32738275-32739567 27 4.5
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 27 4.5
12_02_0517 - 19930197-19931585,19932064-19932253,19933887-19934044 26 5.9
12_01_0926 + 9178804-9180324,9180612-9181157 26 5.9
07_03_1150 - 24375859-24376050,24376173-24376283,24376488-243766... 26 5.9
03_06_0662 + 35377974-35378270,35378354-35378623,35378795-353789... 26 5.9
08_02_0294 - 15432424-15432669,15433007-15433099,15433168-154332... 26 7.8
07_01_1058 - 9292890-9293655,9293831-9294600 26 7.8
06_01_0833 - 6288410-6288564,6289948-6290239,6290578-6290670,629... 26 7.8
04_01_0301 + 4016588-4016627,4016715-4018837 26 7.8
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 77.0 bits (181), Expect = 3e-15
Identities = 33/71 (46%), Positives = 52/71 (73%)
Frame = +3
Query: 111 EEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKVNKT 290
++A +++ M T++I+ TRLLDNE +++K E+ R E ++ +KIKEN EKIK+NK
Sbjct: 4 DDADDDQLASMSTEDIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQ 63
Query: 291 LPYLVSNVIEL 323
LPYLV N++E+
Sbjct: 64 LPYLVGNIVEI 74
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 66.9 bits (156), Expect = 3e-12
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +3
Query: 111 EEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKVNKT 290
++A +++ M T++I+ +RLLDNEI+ E+ R E ++ +KIKEN EKIK+NK
Sbjct: 4 DDAEDDQLASMSTEDIVRASRLLDNEIR---DELQRTNLELESFKEKIKENQEKIKLNKQ 60
Query: 291 LPYLVSNVIEL 323
LPYLV N++E+
Sbjct: 61 LPYLVGNIVEI 71
>11_06_0768 +
27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 30.3 bits (65), Expect = 0.36
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +3
Query: 48 IENTQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIA- 224
+++ Q+ MA +DKS + LS +V DE+++ LLDNEI+++ SE R
Sbjct: 531 VDSLQVVMANAQQDKSFSRN----LSLQVHVAAVDEMLN---LLDNEIQLLHSEHSRTRE 583
Query: 225 ----HEHQAQNDKIKENTEKIKVNKTLPYLV 305
H Q D+ + +K K L L+
Sbjct: 584 LSAHHAKQVLEDQDWNSQQKAKSITELDELI 614
>09_02_0289 -
6941154-6941399,6941630-6941722,6941801-6941884,
6947011-6947146,6947310-6947455,6947826-6948051,
6948595-6948677,6949004-6949198,6949276-6949374,
6949762-6949875,6949949-6950036,6950353-6950558,
6950850-6950902,6951074-6951377,6952195-6952283,
6952675-6953052,6953665-6953726,6954124-6954189,
6955126-6955205
Length = 915
Score = 29.5 bits (63), Expect = 0.63
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 200 HYFNFVVQESCTADDFISRHTKDFLAKRFFSILPN 96
H F V CTAD +++ H D+L K I PN
Sbjct: 637 HVFPNKVLVDCTADTYVACHYYDWLKKGIHVITPN 671
>10_08_0765 -
20421813-20423174,20423591-20423771,20423862-20424117,
20424768-20425095,20425218-20426156,20427015-20427761,
20428517-20428789
Length = 1361
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 93 SIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKI 197
S+W+ + LSE VL D+I+++ L D KI
Sbjct: 61 SLWQWRSQGLSEVVLSWSVDQILNKDLLRDKVAKI 95
>09_04_0613 +
18953761-18953932,18954672-18954799,18954885-18954956,
18955033-18955146,18955547-18955615,18955691-18955747,
18956262-18956315,18956387-18956449,18956543-18956605,
18956803-18956967,18957111-18957266,18957315-18957416
Length = 404
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 129 EVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKE 260
E L+ +DE R + ++ +K+ + E+MR+ E Q +++KE
Sbjct: 161 EKLQKTSDEQKRRIQKTEHALKVAEEELMRVQLETTTQLNQLKE 204
>03_05_0836 - 28088832-28089422,28089626-28089831,28089985-28090330
Length = 380
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/63 (23%), Positives = 34/63 (53%)
Frame = +3
Query: 93 SIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEK 272
++ +DG ALS V+ + DE++ + ++ I KS + + H ++ I++ + K
Sbjct: 304 ALGDDGSIALSRNVVVLHVDEMLLLKFFVYDDDMISKSAPIILTLGHNDESFNIEQGSYK 363
Query: 273 IKV 281
++V
Sbjct: 364 LRV 366
>02_04_0115 -
19888252-19888406,19888507-19888573,19888867-19889101,
19889179-19889255,19889350-19889415,19889517-19889565,
19889651-19889701,19889799-19889851,19889973-19890024,
19890126-19890214,19890308-19890393,19890603-19890659,
19890742-19890919,19891852-19891908,19892209-19892439
Length = 500
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 177 LDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIK 278
LDN + +++EV ++ + QA +++I + EK++
Sbjct: 242 LDNGLSALQAEVENLSLKEQALDERISDMREKLR 275
>02_02_0370 + 9509212-9509293,9509905-9511721
Length = 632
Score = 26.6 bits (56), Expect = 4.5
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = -3
Query: 263 VFFYFVVLSLMFVGNPHDFAFHYFNFVVQESCTADDFISRHTKDFLAKRFFSILPNGL-I 87
VF Y ++ + D A+H+++ + +E C D + + +FL K L +GL +
Sbjct: 300 VFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKA--GRLDDGLKL 357
Query: 86 F--*SCSHCYLGIFNLVLNRETIKYVF 12
F SHC I N+V IK +F
Sbjct: 358 FEEMGVSHC---IPNVVTYNTIIKALF 381
>01_07_0265 + 42404297-42404479,42404544-42404723,42404811-42405440
Length = 330
Score = 26.6 bits (56), Expect = 4.5
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 111 EEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMR-IAHEHQAQNDKIKENTEKIKVNK 287
EE L E + D+ +R LL+ ++K +K E MR I H ++ DK K + +
Sbjct: 98 EEILDE--MEEEHDDAFARITLLETQLKALKLENMRLIEHRGKSMWDK-KPPATAVHGGE 154
Query: 288 TLP 296
+LP
Sbjct: 155 SLP 157
>01_06_0888 + 32738275-32739567
Length = 430
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 1 ARGMNTYFIVSLFKTKLKIPK*QWLQL*KISPFGRMEKKRL 123
A+G YF+ +L +T W+QL + P R +KRL
Sbjct: 108 AQGYRDYFLTNLHQTPNTFVLPVWIQLDREEPVLRPRQKRL 148
>01_06_0836 -
32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 174 LLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKVNK 287
L+D + + ++ E +RIA E +A + +K ++ IK K
Sbjct: 524 LIDEKKEELQKEAIRIAEERRAITEYLKNESDIIKQEK 561
>12_02_0517 - 19930197-19931585,19932064-19932253,19933887-19934044
Length = 578
Score = 26.2 bits (55), Expect = 5.9
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +3
Query: 99 WEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIK 278
WE+GE A ++ +R+ ++ I ++DN++ + R+ E + N + +
Sbjct: 247 WEEGEHAHVDDHMRLMSNSIYYDLLIVDNQVPFF--VLARLFEEFRRYNGE----HPIVL 300
Query: 279 VNKTLPYLVSN 311
VN L L+SN
Sbjct: 301 VNTPLVNLISN 311
>12_01_0926 + 9178804-9180324,9180612-9181157
Length = 688
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +3
Query: 177 LDNEIKIMKSEVMRIAHEHQA---QNDKIKENTEKIK 278
L+N + MK + ++ E++ +N+K+KE EK+K
Sbjct: 494 LNNLTEAMKDVLPKVKEENEKVKEENEKVKEQDEKVK 530
>07_03_1150 -
24375859-24376050,24376173-24376283,24376488-24376655,
24376850-24377451,24377546-24377648,24378461-24378610,
24379918-24379956
Length = 454
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 108 GEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIK 278
GE S E+ ++ R R++D+E+ S+ + E + Q +K+K+ +I+
Sbjct: 115 GEHIHSLELKLTELEKFPERVRVIDDELMRSDSQCWLLMEEVRCQEEKLKKAALQIE 171
>03_06_0662 +
35377974-35378270,35378354-35378623,35378795-35378973,
35380073-35380116,35380295-35380384,35380472-35380588,
35380679-35380803,35380883-35381155,35381253-35381386,
35381518-35381604,35381714-35381831
Length = 577
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 284 VHFNLLRVFFYFVVLSLMFVGNPHDFAFHYFNFV 183
+H N L+ F ++ L +++V H F YFN V
Sbjct: 10 LHQNCLKALFLWLCLMVIYVTVIHTFTNLYFNSV 43
>08_02_0294 -
15432424-15432669,15433007-15433099,15433168-15433251,
15434311-15434446,15434601-15434746,15435017-15435242,
15435885-15435967,15436867-15437061,15437148-15437246,
15438237-15438350,15438424-15438511,15438790-15438995,
15439306-15439358,15440473-15440776,15441278-15441366,
15441584-15441958,15442382-15442446,15442945-15442970,
15444007-15444225
Length = 948
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 170 CTADDFISRHTKDFLAKRFFSILPN 96
CTAD ++ H D+L K I PN
Sbjct: 680 CTADTSVASHYYDWLKKGIHVITPN 704
>07_01_1058 - 9292890-9293655,9293831-9294600
Length = 511
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 105 DGEEALSEEVLRMPTDEIISRTRLLDNEIK 194
DG+ AL E+ MPTD+I ++T LD I+
Sbjct: 462 DGDMALPEQ---MPTDQISNQTEGLDQYIQ 488
>06_01_0833 -
6288410-6288564,6289948-6290239,6290578-6290670,
6290784-6290857,6290976-6291045,6291140-6291217,
6291329-6291430,6291583-6291645,6291802-6291951,
6292037-6292180,6292266-6292499
Length = 484
Score = 25.8 bits (54), Expect = 7.8
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -3
Query: 323 QFNNVGNKVG*CFVHFNLLRVFFYFVVLSLMFVGNPHDFAFH 198
++ N G V FV L VF V L+L+ N HDFA H
Sbjct: 337 KYTNAGAHV---FVTMLLTVVFTAAVALALVNAVNSHDFAAH 375
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 25.8 bits (54), Expect = 7.8
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +3
Query: 3 TRHEHIFYRFSIQN*-IENTQITMATTLEDKSIWEDGEEALSE-EVLRMPTDEIISRTRL 176
T+ + I + I+ +E +T A K+ +E E E L+ +E+ + L
Sbjct: 295 TKQKQIMFEAKIETLNMELVALTEAKEAAAKACEAQNDEITKELEDLKRKFEELQTNKDL 354
Query: 177 LDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKV 281
++ E ++SEV+ I ++ K+K + ++V
Sbjct: 355 VEGENDKLQSEVLAIEEKYGQSEAKVKWLNQILRV 389
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,441,914
Number of Sequences: 37544
Number of extensions: 130517
Number of successful extensions: 367
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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