Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E11
(325 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 100 2e-22
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 0.58
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 29 1.0
Z81123-3|CAB03366.1| 102|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 27 2.3
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 27 2.3
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 27 2.3
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 27 2.3
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 27 2.3
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 27 2.3
AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical ... 27 2.3
U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop heli... 27 3.1
U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop heli... 27 3.1
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 27 3.1
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical pr... 27 4.1
L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical pr... 27 4.1
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 27 4.1
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 27 4.1
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 27 4.1
AF003740-8|AAC48136.1| 320|Caenorhabditis elegans Hypothetical ... 27 4.1
Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical p... 26 5.4
Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 26 5.4
AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical ... 26 5.4
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 26 5.4
AF038618-11|AAM98016.1| 419|Caenorhabditis elegans P38 map kina... 26 5.4
Z83107-8|CAB05504.1| 348|Caenorhabditis elegans Hypothetical pr... 26 7.2
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 26 7.2
U41528-2|AAK39168.1| 125|Caenorhabditis elegans Hypothetical pr... 25 9.5
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 25 9.5
AL021447-3|CAA16274.1| 459|Caenorhabditis elegans Hypothetical ... 25 9.5
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 100 bits (240), Expect = 2e-22
Identities = 46/71 (64%), Positives = 59/71 (83%)
Frame = +3
Query: 111 EEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKVNKT 290
E+A+ EE+L+M T+++ SRT LLDNEI+IM+SEV RI H ++IKENTE+IKVNKT
Sbjct: 19 EDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNKT 78
Query: 291 LPYLVSNVIEL 323
LPYLVSNV+EL
Sbjct: 79 LPYLVSNVVEL 89
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 29.5 bits (63), Expect = 0.58
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 90 KSIWEDGEEALSEEVLRMPTDEI---ISRTRLLDNEIKIMKSEVMRIAHEHQAQND 248
+S W+ E LR+ D + TR L +E+K ++SE+ R H+AQ D
Sbjct: 184 QSTWDVETLTRQNEALRVELDGVRQGFHETRELADEVKHLRSELQRQQEIHRAQFD 239
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/59 (25%), Positives = 33/59 (55%)
Frame = +3
Query: 111 EEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKVNK 287
+EAL+++ + P DEI++ + E+K +++ E Q + D I ++ +++ V K
Sbjct: 511 DEALAQQQQK-PKDEIVAESEKKLKELKERNKQLVMEKSEIQRELDNINDHLDQVLVEK 568
>Z81123-3|CAB03366.1| 102|Caenorhabditis elegans Hypothetical
protein T14D7.3 protein.
Length = 102
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 150 DEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIK 278
D+ I RTR N +KI+ E ++ E Q + D + E +K++
Sbjct: 15 DQKIMRTRQELNSVKIIMKENVQKIMERQGKLDDLVERAQKLE 57
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 102 EDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKV 281
E E L++ ++R+ +I DN I +++++ + +D KEN KI +
Sbjct: 649 EKAAELLNKSIVRVEQPDIALDDDDFDNNIMVVEADKENQRGDDSMDHDGEKENAPKIDI 708
Query: 282 NK 287
K
Sbjct: 709 AK 710
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 102 EDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKV 281
E E L++ ++R+ +I DN I +++++ + +D KEN KI +
Sbjct: 649 EKAAELLNKSIVRVEQPDIALDDDDFDNNIMVVEADKENQRGDDSMDHDGEKENAPKIDI 708
Query: 282 NK 287
K
Sbjct: 709 AK 710
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 102 EDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKV 281
E E L++ ++R+ +I DN I +++++ + +D KEN KI +
Sbjct: 355 EKAAELLNKSIVRVEQPDIALDDDDFDNNIMVVEADKENQRGDDSMDHDGEKENAPKIDI 414
Query: 282 NK 287
K
Sbjct: 415 AK 416
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +3
Query: 51 ENTQITMATTLEDKSIWE-DGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAH 227
EN ++ A++ D I + E+ EE L E R +++MK E+ +
Sbjct: 522 ENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASI 581
Query: 228 EHQAQNDKIKENTEKI 275
Q +KE + +
Sbjct: 582 TSDRQIQSLKEKVDSL 597
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +3
Query: 51 ENTQITMATTLEDKSIWE-DGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAH 227
EN ++ A++ D I + E+ EE L E R +++MK E+ +
Sbjct: 522 ENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASI 581
Query: 228 EHQAQNDKIKENTEKI 275
Q +KE + +
Sbjct: 582 TSDRQIQSLKEKVDSL 597
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 102 EDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKV 281
E E L++ ++R+ +I DN I +++++ + +D KEN KI +
Sbjct: 649 EKAAELLNKSIVRVEQPDIALDDDDFDNNIMVVEADKENQRGDDSMDHDGEKENAPKIDI 708
Query: 282 NK 287
K
Sbjct: 709 AK 710
>AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical
protein F37E3.1 protein.
Length = 798
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/69 (18%), Positives = 32/69 (46%)
Frame = +3
Query: 81 LEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKE 260
L D+ +W++ + EVL +++ + +++ +IK + + E + IK
Sbjct: 618 LFDEKMWQEHDRQWLFEVLNQALEKLTRQINVVEKDIKELTEKTENKIKEEDDEESDIKM 677
Query: 261 NTEKIKVNK 287
+ ++ K K
Sbjct: 678 DEDETKEEK 686
>U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop helix
protein 27 protein.
Length = 321
Score = 27.1 bits (57), Expect = 3.1
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +3
Query: 48 IENTQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAH 227
I N I T+ KS EE +S+EV+ ++++ L N SE R
Sbjct: 85 ITNELINECKTIVQKS----EEEHISQEVVLFRIVKLVTGVNLESNFSSNDLSESTRRKF 140
Query: 228 EHQAQNDKIKENTEKIKVNK 287
+ +++ K+K EKI+ K
Sbjct: 141 DTESERRKVKTEREKIRRKK 160
>U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop helix
protein 25 protein.
Length = 313
Score = 27.1 bits (57), Expect = 3.1
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +3
Query: 48 IENTQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAH 227
I N I T+ KS EE +S+EV+ ++++ L N SE R
Sbjct: 77 ITNELINECKTIVQKS----EEEHISQEVVLFRIVKLVTGVNLESNFSSNDLSESTRRKF 132
Query: 228 EHQAQNDKIKENTEKIKVNK 287
+ +++ K+K EKI+ K
Sbjct: 133 DTESERRKVKTEREKIRRKK 152
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 114 EALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEK 272
E +++ + R ++I S+ R ++ E+K K E IAHE +ND E ++
Sbjct: 821 ELMTDSMSRQSKEQIESKDREIE-ELKA-KLEKQNIAHEKALRNDPYSEEYKR 871
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 105 DGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKVN 284
D + L+ + +M DE+I RT++ I ++ + +++ E + + KIKE+ E K
Sbjct: 1587 DHMDTLTIKAEQMSDDEVI-RTKVAVTAIDQLRKKWLKMNEELKKMHQKIKESIEFTKFV 1645
Query: 285 KT 290
T
Sbjct: 1646 ST 1647
>Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical
protein T27F6.8 protein.
Length = 301
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 182 VQESCTADDFISRHTKDFLAKR 117
+ E+C +DD RH+K ++A R
Sbjct: 102 INEACASDDAFERHSKAYVAIR 123
>L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical
protein F10E9.2 protein.
Length = 286
Score = 26.6 bits (56), Expect = 4.1
Identities = 24/85 (28%), Positives = 37/85 (43%)
Frame = +3
Query: 69 MATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQND 248
M T KS E+GE S P + S+TRL D +KI + +++ + + Q ++
Sbjct: 192 MITLRTQKSSSEEGEGEFSGRGDPAPLEVGDSKTRLSD--LKITRHKMLLLDVDDQKKDG 249
Query: 249 KIKENTEKIKVNKTLPYLVSNVIEL 323
+E EK K NV L
Sbjct: 250 SGEEKKEKKSAEKEKKISHENVQSL 274
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 105 DGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDK-IKENTE 269
+ E EVL+ P+DE S + L ++ S VM + Q + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 105 DGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDK-IKENTE 269
+ E EVL+ P+DE S + L ++ S VM + Q + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 105 DGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDK-IKENTE 269
+ E EVL+ P+DE S + L ++ S VM + Q + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AF003740-8|AAC48136.1| 320|Caenorhabditis elegans Hypothetical
protein C41D11.1 protein.
Length = 320
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 51 ENTQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIK 194
E I M +E IW+D + +E +PTD LL N+ +
Sbjct: 239 ETMPIKMIKVIEVDGIWKDDVNFVPQEGTLLPTDHDEKTVVLLGNDYR 286
>Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +3
Query: 168 TRLLDNEIKIMKSEVMR-IAH---EHQAQNDKIKENTEKIKVNKTLPYLV 305
TR+LD+E IM SE++R H EH ++ I +K K +L +L+
Sbjct: 239 TRVLDDEEGIMYSEIIREFIHEKMEHGSRYGGIALIADKFKDRMSLEFLI 288
>Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 26.2 bits (55), Expect = 5.4
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 110 RRSA*RGSPSYAY**NHQPYKTPG----QRN*NNEKRSHEDCPRTSSSKRQNKRKHGED 274
RRS R SP + + P ++P QR+ +N RS R+SSS R++ + G D
Sbjct: 517 RRSNSR-SPPRDHKRSRSPSRSPSPRRRQRSSSNSSRSSGSSSRSSSSSRKSSPERGRD 574
>AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +3
Query: 168 TRLLDNEIKIMKSEVMR-IAH---EHQAQNDKIKENTEKIKVNKTLPYLV 305
TR+LD+E IM SE++R H EH ++ I +K K +L +L+
Sbjct: 239 TRVLDDEEGIMYSEIIREFIHEKMEHGSRYGGIALIADKFKDRMSLEFLI 288
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 26.2 bits (55), Expect = 5.4
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 110 RRSA*RGSPSYAY**NHQPYKTPG----QRN*NNEKRSHEDCPRTSSSKRQNKRKHGED 274
RRS R SP + + P ++P QR+ +N RS R+SSS R++ + G D
Sbjct: 517 RRSNSR-SPPRDHKRSRSPSRSPSPRRRQRSSSNSSRSSGSSSRSSSSSRKSSPERGRD 574
>AF038618-11|AAM98016.1| 419|Caenorhabditis elegans P38 map kinase
family protein 2,isoform a protein.
Length = 419
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 191 NFVVQESCTADDFISRHTKDFLAKRFFSILPNGL 90
N V E C F+S FL FF IL GL
Sbjct: 180 NIAVNERCEVKVFLSFSQLSFLILSFFKILDFGL 213
>Z83107-8|CAB05504.1| 348|Caenorhabditis elegans Hypothetical
protein F32A7.7 protein.
Length = 348
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 155 FISRHTKDFLAKRFFSILPNGL--IF*SCSHCYLGIFNLVLNRETIKYV 15
+IS T + L + S++ G+ +F S S C + IF R+T K+V
Sbjct: 184 YISDETSNNLRVHWESVIGIGIQCVFISISFCLIFIFGFKCYRQTRKFV 232
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +3
Query: 117 ALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIKVNKTL 293
AL E L++ T+ L +I+++KSE R++ + Q ++ +N EK+ ++ L
Sbjct: 280 ALQSEKLKL-TEISQQEISGLKKKIEVLKSENHRLSSQIQQNTNEAAKNHEKLLEDRVL 337
>U41528-2|AAK39168.1| 125|Caenorhabditis elegans Hypothetical
protein C15C7.5 protein.
Length = 125
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 108 GEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKENTEKIK 278
G EAL+E + T+EI R LD ++ + + ++ +A ND++ E ++ K
Sbjct: 30 GIEALNEGEVTEETEEI----RKLDTQLDHLNDYMSKMEERLKAHNDRMMETLKQQK 82
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = +3
Query: 84 EDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRIAHEHQAQNDKIKEN 263
++K E+ E+ + E E R + ++K + + + + + +K+K
Sbjct: 888 KEKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVEKEKVKAE 947
Query: 264 TEKIKVNK 287
EK+KV K
Sbjct: 948 EEKVKVEK 955
>AL021447-3|CAA16274.1| 459|Caenorhabditis elegans Hypothetical
protein F19B2.7 protein.
Length = 459
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 228 EHQAQNDKIKENTEKIKVNKTLPYLVSN 311
EH +Q+ + N E+ K+N T P +V+N
Sbjct: 128 EHDSQDIQEDINEEQRKINNTNPTIVNN 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,762,215
Number of Sequences: 27780
Number of extensions: 126890
Number of successful extensions: 520
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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