Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E10
(223 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 109 4e-25
03_01_0547 + 4093196-4093657,4094267-4095148 109 4e-25
03_01_0544 + 4082528-4082989,4083585-4084466 109 4e-25
03_01_0543 + 4076981-4077442,4078145-4079026 109 4e-25
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 73 3e-14
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 73 4e-14
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 71 1e-13
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 62 6e-11
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 62 6e-11
02_04_0462 + 23131433-23132836 36 0.003
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 36 0.006
06_03_0748 - 24126603-24128038,24128582-24128897 29 0.38
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 29 0.67
03_04_0206 - 18493178-18495310 29 0.67
09_04_0094 - 14552970-14553182,14553275-14553679,14553780-145539... 27 2.0
03_02_0443 + 8538938-8539069,8540635-8540859,8541386-8541523 27 2.7
01_04_0043 + 15375459-15377606 27 2.7
03_03_0053 + 14109636-14109948,14110075-14110302,14112030-141121... 26 3.6
03_02_0080 + 5498638-5498699,5499121-5499190,5499551-5500711,550... 26 3.6
07_03_1663 - 28449654-28451867 25 6.2
04_03_0839 + 20220909-20222471 25 6.2
04_03_0166 + 12175952-12176045,12176080-12176762 25 6.2
02_02_0224 - 8033098-8034552 25 6.2
11_01_0438 - 3349506-3351239 25 8.3
09_02_0008 + 2922562-2922954 25 8.3
06_03_1515 - 30707600-30707613,30708093-30708167,30708596-307086... 25 8.3
01_06_0474 + 29604201-29604527,29604634-29604988,29605071-296054... 25 8.3
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 109 bits (261), Expect = 4e-25
Identities = 50/72 (69%), Positives = 61/72 (84%)
Frame = +2
Query: 8 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 187
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 188 IGYDSAAVAFVP 223
+GY+ + FVP
Sbjct: 181 VGYNPDKIPFVP 192
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 109 bits (261), Expect = 4e-25
Identities = 50/72 (69%), Positives = 61/72 (84%)
Frame = +2
Query: 8 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 187
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 188 IGYDSAAVAFVP 223
+GY+ + FVP
Sbjct: 181 VGYNPDKIPFVP 192
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 109 bits (261), Expect = 4e-25
Identities = 50/72 (69%), Positives = 61/72 (84%)
Frame = +2
Query: 8 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 187
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 188 IGYDSAAVAFVP 223
+GY+ + FVP
Sbjct: 181 VGYNPDKIPFVP 192
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 109 bits (261), Expect = 4e-25
Identities = 50/72 (69%), Positives = 61/72 (84%)
Frame = +2
Query: 8 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 187
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 188 IGYDSAAVAFVP 223
+GY+ + FVP
Sbjct: 181 VGYNPDKIPFVP 192
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 72.9 bits (171), Expect = 3e-14
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +2
Query: 5 EGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIK 184
+GEFE G K GQTREH LLA TLGV +LIV +NKMD +S+ R++EI+ ++ +++
Sbjct: 111 KGEFETGYEKGGQTREHVLLAKTLGVAKLIVVINKMDEPTVKWSKERYDEIESKMVPFLR 170
Query: 185 KIGYD-SAAVAFVP 223
GY+ V F+P
Sbjct: 171 SSGYNVKKDVHFLP 184
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 72.5 bits (170), Expect = 4e-14
Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +2
Query: 5 EGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIK 184
+GEFE G + GQTREH LLA TLGV +L+V +NKMD + +S+ R++EI+ ++ ++K
Sbjct: 66 KGEFETGYERGGQTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLK 125
Query: 185 KIGYD-SAAVAFVP 223
GY+ V F+P
Sbjct: 126 SSGYNVKKDVHFLP 139
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 70.9 bits (166), Expect = 1e-13
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = +2
Query: 8 GEFEAGISKNG--QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI 181
G FEAG+ NG QT+EH+ L + GV LIV VNKMDS E YS+ RF IK ++ +++
Sbjct: 348 GSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKMDSVE--YSKERFNFIKSQLGAFL 405
Query: 182 KKIGYDSAAVAFVP 223
+ GY +AVA+VP
Sbjct: 406 RSCGYKDSAVAWVP 419
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 62.1 bits (144), Expect = 6e-11
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Frame = +2
Query: 8 GEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVS 172
G FEAG+ G QT+EHA L + GV+QLIV VNKMD+ YS+ RFE IK ++
Sbjct: 361 GSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYSKERFEFIKVQLG 418
Query: 173 SYIKKIGYDSAAVAFVP 223
S+++ + ++V ++P
Sbjct: 419 SFLRSCNFKDSSVTWIP 435
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 62.1 bits (144), Expect = 6e-11
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Frame = +2
Query: 8 GEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVS 172
G FEAG+ G QT+EHA L + GV+QLIV VNKMD+ YS+ RFE IK ++
Sbjct: 361 GSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYSKERFEFIKVQLG 418
Query: 173 SYIKKIGYDSAAVAFVP 223
S+++ + ++V ++P
Sbjct: 419 SFLRSCNFKDSSVTWIP 435
>02_04_0462 + 23131433-23132836
Length = 467
Score = 36.3 bits (80), Expect = 0.003
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +2
Query: 41 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYDSAAVAFV 220
QT+EH LLA +GV +++V +NK D + E + ++ EV + YD V V
Sbjct: 173 QTKEHILLAKQVGVPKIVVFLNKKDQVD---DEELLQLVELEVRELLSSYEYDGDEVPIV 229
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 35.5 bits (78), Expect = 0.006
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 41 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIK 184
QT+EH LLA +GV L+ +NK+D+ + P E +E+ S+ K
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYK 217
>06_03_0748 - 24126603-24128038,24128582-24128897
Length = 583
Score = 29.5 bits (63), Expect = 0.38
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 131 YSESRFEEIKKEVSSYIKKIGYDSAAVAFVP 223
+S RF KK++++ IK+I D A FVP
Sbjct: 464 HSSERFHPSKKDINAKIKEIFVDIKAAGFVP 494
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.7 bits (61), Expect = 0.67
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -1
Query: 223 GYESDGSRIVTNF---LDVGRDFLLDFLKSRLTVWWLSGVHFVYSYNQLLDS 77
G E G RIV +D R+ +L+ L VW G+HFVY + L++
Sbjct: 212 GQELAGVRIVEPLRRCMDRARE-ILEIKTGGLVVWTRGGIHFVYRGSSYLEN 262
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.7 bits (61), Expect = 0.67
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 101 VNKMDSTEPPYSESRFEEIKKEV 169
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>09_04_0094 -
14552970-14553182,14553275-14553679,14553780-14553902,
14554156-14554367,14554486-14554514,14554661-14555166
Length = 495
Score = 27.1 bits (57), Expect = 2.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 98 GVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYDSAAVAFVP 223
G + + PP +++ +E ++ VSS+ G +AA A VP
Sbjct: 43 GTSSSTAAAPPPTDAALQEFRRWVSSHGADAGAGAAAPAAVP 84
>03_02_0443 + 8538938-8539069,8540635-8540859,8541386-8541523
Length = 164
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 83 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYDSAAV 211
+ L+V + D+T+ SES +I K++ + KKI A V
Sbjct: 85 ESLVVATSSTDATDNSKSESSAPDIDKKIRALKKKIRLAEAQV 127
>01_04_0043 + 15375459-15377606
Length = 715
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 196 VTNFLDVGRDFLLDFLKSRLTVWWLSGVHF 107
V ++ FL DFL S+LTV++ SG F
Sbjct: 298 VFRVIETELSFLADFLYSKLTVFYASGWWF 327
>03_03_0053 +
14109636-14109948,14110075-14110302,14112030-14112181,
14112305-14112578,14112687-14112739
Length = 339
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 223 GYESDGSRIVTNFLDVGRDFLLDFLKSRLTV 131
G SDG IV ++G FL FL+ R TV
Sbjct: 92 GRYSDGRLIVDFLAELGLPFLTPFLRGRETV 122
>03_02_0080 +
5498638-5498699,5499121-5499190,5499551-5500711,
5500940-5501029,5501147-5501464
Length = 566
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 159 LISSNRDSLYGGSVESILFTPTISCLTPSVKASRACS 49
L S ++ S+ G + TI+CL PS K S +CS
Sbjct: 254 LPSLSKVSMVHGDAKVRAMLVTITCLLPSEKGSVSCS 290
>07_03_1663 - 28449654-28451867
Length = 737
Score = 25.4 bits (53), Expect = 6.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 118 GVHFVYSYNQLLDSECESEQ 59
GV V++Y+Q++DS C S Q
Sbjct: 233 GVADVFAYSQMIDSLCRSGQ 252
>04_03_0839 + 20220909-20222471
Length = 520
Score = 25.4 bits (53), Expect = 6.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 117 PLSHHTVSLDLRKSRRKSLPTSRKLVTI 200
P S+ LDLR R ++PT +LVT+
Sbjct: 284 PYSYLDSLLDLRVEGRDAVPTDEELVTL 311
>04_03_0166 + 12175952-12176045,12176080-12176762
Length = 258
Score = 25.4 bits (53), Expect = 6.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 155 FPQIETHCMVAQWSPFCLLLQSV 87
F QIE + A WS F L+QSV
Sbjct: 113 FKQIENESISAAWSRFTNLVQSV 135
>02_02_0224 - 8033098-8034552
Length = 484
Score = 25.4 bits (53), Expect = 6.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 126 GSVESILFTPTISCLTPSVKASRACSRVCPFFEIPA 19
GSV L ++ L P V S A + VC FF PA
Sbjct: 94 GSVMFELVRRSVPHLRPLVVGSPAAAIVCDFFGTPA 129
>11_01_0438 - 3349506-3351239
Length = 577
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/32 (31%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 125 PPYSESRFEEIKKEVSSYIKKIGY-DSAAVAF 217
PPY ++R + ++ + + ++GY ++AAV F
Sbjct: 453 PPYFDARLDGVRPRLVAAPSEVGYGEAAAVRF 484
>09_02_0008 + 2922562-2922954
Length = 130
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = -2
Query: 159 LISSNRDSLYGGSVESILFTPTISCLTPSVKASRACSRVCPFFEIPASNSPSC 1
L+ + R YG ++ IL + T VK + CS V + + P C
Sbjct: 6 LMGAMRVPTYGRYLKDILNNKRLLLTTGMVKLTEECSNVILHWLLEKKKDPGC 58
>06_03_1515 -
30707600-30707613,30708093-30708167,30708596-30708647,
30708751-30708831,30709145-30709219,30709870-30709977,
30710026-30710032,30710133-30710268,30710361-30710685
Length = 290
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 108 KWTPLSHHTVSLDLRKSRRKSLP 176
+W+P S +SL L +SRR S P
Sbjct: 44 RWSPPSPFRLSLTLSRSRRHSPP 66
>01_06_0474 +
29604201-29604527,29604634-29604988,29605071-29605411,
29606502-29606940,29607558-29607913
Length = 605
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 105 FTPTISCLTPSVKASRACSRVCPFFEIPASNS 10
FT T SC+ PS ++ SR C P++++
Sbjct: 391 FTSTSSCMAPSRRSMAVRSRSCSGRPTPSAHA 422
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,868,320
Number of Sequences: 37544
Number of extensions: 97290
Number of successful extensions: 334
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 14,793,348
effective HSP length: 53
effective length of database: 12,803,516
effective search space used: 256070320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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