Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E08
(321 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456980-1|CAG33261.1| 150|Homo sapiens PDE6D protein. 93 2e-19
BT007278-1|AAP35942.1| 150|Homo sapiens phosphodiesterase 6D, c... 93 2e-19
BC007831-1|AAH07831.1| 150|Homo sapiens phosphodiesterase 6D, c... 93 2e-19
AJ001626-1|CAA04880.1| 150|Homo sapiens p17 protein protein. 93 2e-19
AF045999-1|AAC39720.1| 150|Homo sapiens rod cGMP phosphodiester... 93 2e-19
AF042835-1|AAC25953.1| 150|Homo sapiens phosphodiesterase delta... 93 2e-19
AF022912-1|AAB87872.1| 150|Homo sapiens cGMP phosphodiesterase ... 93 2e-19
AC073476-3|AAY24151.1| 150|Homo sapiens unknown protein. 93 2e-19
BC108699-1|AAI08700.1| 455|Homo sapiens 5'-nucleotidase domain ... 28 5.4
AL121963-7|CAI19534.1| 455|Homo sapiens protein ( s (hypothetic... 28 5.4
AL121963-6|CAI19533.1| 195|Homo sapiens protein ( s (hypothetic... 28 5.4
AL050331-1|CAI21537.1| 455|Homo sapiens protein ( Human DNA seq... 28 5.4
>CR456980-1|CAG33261.1| 150|Homo sapiens PDE6D protein.
Length = 150
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLILRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+ LRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
>BT007278-1|AAP35942.1| 150|Homo sapiens phosphodiesterase 6D,
cGMP-specific, rod, delta protein.
Length = 150
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLILRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+ LRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
>BC007831-1|AAH07831.1| 150|Homo sapiens phosphodiesterase 6D,
cGMP-specific, rod, delta protein.
Length = 150
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLILRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+ LRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
>AJ001626-1|CAA04880.1| 150|Homo sapiens p17 protein protein.
Length = 150
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLILRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+ LRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
>AF045999-1|AAC39720.1| 150|Homo sapiens rod cGMP phosphodiesterase
delta subunit protein.
Length = 150
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLILRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+ LRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
>AF042835-1|AAC25953.1| 150|Homo sapiens phosphodiesterase delta
subunit protein.
Length = 150
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLILRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+ LRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
>AF022912-1|AAB87872.1| 150|Homo sapiens cGMP phosphodiesterase
delta subunit protein.
Length = 150
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLILRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+ LRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
>AC073476-3|AAY24151.1| 150|Homo sapiens unknown protein.
Length = 150
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +1
Query: 142 AKQDRVETILKGFQINWLILRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
AK +R IL+GF++NW+ LRDA++GKILWQ ED+S P VEHEARVPK+ILKC+ VSRE
Sbjct: 3 AKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRE 62
>BC108699-1|AAI08700.1| 455|Homo sapiens 5'-nucleotidase domain
containing 1 protein.
Length = 455
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 302 HFSIRFGTRASCSTSGFDISSLYCQRIFPESASRRINQF 186
HFS+ A+C GFD+ C+ PESA N F
Sbjct: 4 HFSL-----AACDVVGFDLDHTLCRYNLPESAPLIYNSF 37
>AL121963-7|CAI19534.1| 455|Homo sapiens protein ( s (hypothetical)
genes, the ).).
Length = 455
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 302 HFSIRFGTRASCSTSGFDISSLYCQRIFPESASRRINQF 186
HFS+ A+C GFD+ C+ PESA N F
Sbjct: 4 HFSL-----AACDVVGFDLDHTLCRYNLPESAPLIYNSF 37
>AL121963-6|CAI19533.1| 195|Homo sapiens protein ( s (hypothetical)
genes, the ).).
Length = 195
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 302 HFSIRFGTRASCSTSGFDISSLYCQRIFPESASRRINQF 186
HFS+ A+C GFD+ C+ PESA N F
Sbjct: 4 HFSL-----AACDVVGFDLDHTLCRYNLPESAPLIYNSF 37
>AL050331-1|CAI21537.1| 455|Homo sapiens protein ( Human DNA
sequence from clone RP3-486I3 on chromosome 6q22.1-22.3
Contains the 3' end of a novel gene, a novel gene, the
gene for ).
Length = 455
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 302 HFSIRFGTRASCSTSGFDISSLYCQRIFPESASRRINQF 186
HFS+ A+C GFD+ C+ PESA N F
Sbjct: 4 HFSL-----AACDVVGFDLDHTLCRYNLPESAPLIYNSF 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,191,152
Number of Sequences: 237096
Number of extensions: 920329
Number of successful extensions: 7632
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7632
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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