Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E08
(321 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14635-12|AAC46655.1| 159|Caenorhabditis elegans Phosphodiester... 85 8e-18
Z69635-2|CAA93462.1| 555|Caenorhabditis elegans Hypothetical pr... 31 0.24
Z69635-1|CAA93459.1| 515|Caenorhabditis elegans Hypothetical pr... 31 0.24
U88169-13|AAO12405.1| 148|Caenorhabditis elegans Hypothetical p... 28 1.3
Z47075-1|CAA87382.2| 308|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical pr... 26 5.3
Z72511-8|CAJ58499.2| 218|Caenorhabditis elegans Hypothetical pr... 26 5.3
Z72511-7|CAA96662.3| 269|Caenorhabditis elegans Hypothetical pr... 26 5.3
U29381-7|AAA68755.1| 225|Caenorhabditis elegans Hypothetical pr... 26 5.3
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 26 5.3
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 26 7.0
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 26 7.0
U00040-2|AAA50667.4| 366|Caenorhabditis elegans Hypothetical pr... 26 7.0
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 26 7.0
AF003137-1|AAB93642.1| 294|Caenorhabditis elegans Hypothetical ... 26 7.0
Z71262-2|CAA95809.1| 189|Caenorhabditis elegans Hypothetical pr... 25 9.2
>U14635-12|AAC46655.1| 159|Caenorhabditis elegans Phosphodiesterase
delta-like protein1 protein.
Length = 159
Score = 85.4 bits (202), Expect = 8e-18
Identities = 34/57 (59%), Positives = 48/57 (84%)
Frame = +1
Query: 151 DRVETILKGFQINWLILRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVVSRE 321
++ E+IL GF++NW+ LRDA++GK+LWQ EDM++P+ EH+A VPK +LKCR VSRE
Sbjct: 15 EKAESILAGFKLNWMNLRDAETGKVLWQSTEDMADPKREHKAHVPKNLLKCRTVSRE 71
>Z69635-2|CAA93462.1| 555|Caenorhabditis elegans Hypothetical
protein F19B6.1b protein.
Length = 555
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 196 ILRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVV 312
I++D GKIL Q NE +PE+ H R+P I + +V+
Sbjct: 424 IVKDCVIGKILIQTNETTFDPEL-HYIRLPPHITRYKVI 461
>Z69635-1|CAA93459.1| 515|Caenorhabditis elegans Hypothetical
protein F19B6.1a protein.
Length = 515
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 196 ILRDADSGKILWQYNEDMSNPEVEHEARVPKRILKCRVV 312
I++D GKIL Q NE +PE+ H R+P I + +V+
Sbjct: 384 IVKDCVIGKILIQTNETTFDPEL-HYIRLPPHITRYKVI 421
>U88169-13|AAO12405.1| 148|Caenorhabditis elegans Hypothetical
protein T03F1.12 protein.
Length = 148
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = -2
Query: 191 QFIWKPLRMVSTRSCLAS--SAGKTSVMM 111
QF+W P+ +VS +CL + A +TSVM+
Sbjct: 6 QFVWDPVLLVSQMTCLQTFFYATQTSVML 34
>Z47075-1|CAA87382.2| 308|Caenorhabditis elegans Hypothetical
protein E02H1.1 protein.
Length = 308
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -1
Query: 285 RNPSFMLHFRIRHIFIVLPEDFS*VCITENQPV 187
+N + M FR+ ++ V+ ++F VC +N+P+
Sbjct: 228 KNKTLMAIFRLSNVIEVIEDNFRKVCSFKNKPI 260
>Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical
protein F20D1.6 protein.
Length = 915
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 276 SFMLHFRIRHIFIVLPEDFS*VCITENQ 193
SF+L F IR I+ P D S ENQ
Sbjct: 122 SFLLKFGIRECIIISPNDSSGTFTDENQ 149
>Z72511-8|CAJ58499.2| 218|Caenorhabditis elegans Hypothetical
protein F55A11.6b protein.
Length = 218
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 206 MQTQEKSSGNTMKICRILKWSMKLGFRSVY 295
++ E+ G+ + ICR L W L ++ Y
Sbjct: 60 LEMNERKYGSVLSICRHLAWRYNLSGKTAY 89
>Z72511-7|CAA96662.3| 269|Caenorhabditis elegans Hypothetical
protein F55A11.6a protein.
Length = 269
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 206 MQTQEKSSGNTMKICRILKWSMKLGFRSVY 295
++ E+ G+ + ICR L W L ++ Y
Sbjct: 111 LEMNERKYGSVLSICRHLAWRYNLSGKTAY 140
>U29381-7|AAA68755.1| 225|Caenorhabditis elegans Hypothetical
protein F35D11.9 protein.
Length = 225
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 235 YNEDMSNPEVEHEARVPKRILKCRVVS 315
+N +SNPE HE + +++ R +S
Sbjct: 65 HNASLSNPENSHELEIVSDVIRARNIS 91
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 103 SQFIMTEVLPAEEAKQDRVETILKGFQINWLILRDAD 213
+ F + +PAE+ K DRVE + + + + + R++D
Sbjct: 335 NNFFFGKRIPAEKVKSDRVELAPRLYNLKFKLGRNSD 371
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 88 IGLTESQFIMTEVLPAEEAKQDRVETILKGF--QINW-LILRD 207
IGLT+ F + E+ + +++ TIL GF QI W L L+D
Sbjct: 767 IGLTKVFFKAGVLAHLEDIRDEKLATILTGFQSQIRWHLGLKD 809
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 88 IGLTESQFIMTEVLPAEEAKQDRVETILKGF--QINW-LILRD 207
IGLT+ F + E+ + +++ TIL GF QI W L L+D
Sbjct: 767 IGLTKVFFKAGVLAHLEDIRDEKLATILTGFQSQIRWHLGLKD 809
>U00040-2|AAA50667.4| 366|Caenorhabditis elegans Hypothetical
protein C18H2.2 protein.
Length = 366
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 114 HDRSFARRRSQTRPCGNHP*RLPDKLVDS 200
H RS R+R+QTRP P + L+ S
Sbjct: 240 HSRSSGRKRTQTRPYSPTPDSVSKPLIPS 268
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 88 IGLTESQFIMTEVLPAEEAKQDRVETILKGF--QINW-LILRD 207
IGLT+ F + E+ + +++ TIL GF QI W L L+D
Sbjct: 770 IGLTKVFFKAGVLAHLEDIRDEKLATILTGFQSQIRWHLGLKD 812
>AF003137-1|AAB93642.1| 294|Caenorhabditis elegans Hypothetical
protein C27A12.4 protein.
Length = 294
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 287 FGTRASCSTSGFDISSLYCQRIFPE 213
FG RAS S+ G +S+L ++ PE
Sbjct: 232 FGNRASSSSFGAPLSTLAVDKLIPE 256
>Z71262-2|CAA95809.1| 189|Caenorhabditis elegans Hypothetical
protein F22D6.2 protein.
Length = 189
Score = 25.4 bits (53), Expect = 9.2
Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 5/61 (8%)
Frame = -2
Query: 278 RASCSTSGFDISSLYCQRIFPESASR-----RINQFIWKPLRMVSTRSCLASSAGKTSVM 114
RA C G + YC + F + R R+ + P M +T S L S +
Sbjct: 15 RAGCGFFGASATEGYCSQCFKNTLKRQQDTVRLTSPVVSPSSMAATSSALKSEPSSVDMC 74
Query: 113 M 111
M
Sbjct: 75 M 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,722,357
Number of Sequences: 27780
Number of extensions: 145363
Number of successful extensions: 357
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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