Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_E06
         (257 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    42   9e-07
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   1.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   5.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     20   5.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   7.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    19   7.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 42.3 bits (95), Expect = 9e-07
 Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 19  GRDACLGDSGGPLMCQ--ESGRWYIYGVTSNGYGCARAHRPGVYTKVSSYIEWI 174
           G+DAC  DSGGP++ Q   + R    G+ S G  C +   P   TKV SYI+WI
Sbjct: 341 GKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAECGK--YPNGNTKVGSYIDWI 392


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 100 SNGYGCARAHRPGVYTKVSSYI 165
           S+  G +  H PGVY   + ++
Sbjct: 291 SSALGRSACHSPGVYPSTAGFL 312


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 58  MCQESGRWYIYGVTSNGYGCARAHRPGV 141
           +C+  G+WY+    S G  C   ++  V
Sbjct: 233 LCKGDGKWYL---PSGGCHCKPGYQADV 257


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 137 PGRCARAQPYPLLVTP*MYHLPDS 66
           P   A ++P+P L+ P     PDS
Sbjct: 309 PSDGATSEPFPFLMLPLGADDPDS 332


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 49  GPLMCQESGRWYIYGVTSNGYGCARAHRPGVYTKVSSYIE 168
           G L  + SG++  Y + +N  G    H   +  K++ +IE
Sbjct: 186 GKLDTKTSGKYKEYIIPANYSGWYLNHDYNLENKLNYFIE 225


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 137 PGRCARAQPYPLLVTP*MYHLPDSWHM 57
           P   A ++P+P L+ P     P  W +
Sbjct: 309 PSDGATSEPFPFLMLPLGAGRPAFWSL 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.139    0.459 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,180
Number of Sequences: 438
Number of extensions: 816
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4636803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.7 bits)