Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_E03
         (413 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   122   5e-30
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         26   0.62 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   3.3  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   4.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   4.4  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    22   7.7  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  122 bits (294), Expect = 5e-30
 Identities = 53/74 (71%), Positives = 64/74 (86%)
 Frame = +2

Query: 191 LFEKITKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 370
           LFEK  KN+ IGQ++QP RDLSRFV+WPKYIRIQR +A+LQ+RLK+PPPINQFTQTLDK 
Sbjct: 37  LFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKP 96

Query: 371 TAKGLFKILEKYRP 412
           TA+ + K  +KYRP
Sbjct: 97  TAQQVMKCWKKYRP 110


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.8 bits (54), Expect = 0.62
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 280 YSHPASKGCVTASSQSAAANQPVHP 354
           + HP   G + A SQ     QPVHP
Sbjct: 165 HHHPGLTGLMQAPSQQQQHLQPVHP 189


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 121 DREKSSGRSTCGEES*AQEDCKPS 192
           DR ++ GRS C   S +  D +PS
Sbjct: 884 DRSEAGGRSLCTNGSSSGRDSQPS 907


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = +2

Query: 269 WPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRP 412
           W  ++    +    + RLKV     + T+T+++  A+ +   L ++RP
Sbjct: 216 WKLFLMTSYRSVARKLRLKVCS--RELTETVERVAAEAINSKLHEHRP 261


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 321 SKCRRQSTSSPRH*IKPQPKVCSRSWRNTGH 413
           S+ R +S  +  H I P P   + S+  T H
Sbjct: 660 SRLRNRSARNTNHSIVPPPNANNLSYAETNH 690


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 248 DLSRFVRWPKYIRIQRQKAVLQRRLKVPPP 337
           D++R++ W K I+  R  A+  ++L+ P P
Sbjct: 343 DVARWLEWRKKIKEYRMTAM--KKLQPPKP 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,933
Number of Sequences: 2352
Number of extensions: 7115
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)