Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_E01
         (267 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   0.63 
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    24   1.1  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   2.6  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    21   5.9  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    21   5.9  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          21   7.8  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    21   7.8  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    21   7.8  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = +2

Query: 164 QNTMDVKVKSDAPWH---FLVLLHLSTIYFI 247
           +N   + ++S  PWH   F+V++ L + Y +
Sbjct: 389 ENLYQLVLRSAGPWHMLFFIVIIFLGSFYLV 419



 Score = 22.2 bits (45), Expect = 3.4
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 78  YISNGSYNTASCIAMRPLYTKAHGSLLPGKTRWMSK*NRTRRGT 209
           Y + GS +++       +   +HG LL G T+     NR+ R T
Sbjct: 627 YANLGSRHSSYTSHQSRISYTSHGDLLGGMTKESRLRNRSARNT 670


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = +2

Query: 107 VMHSHAPPLHKGAWLITARQNTMDVKVKSDAPW 205
           +MH   PPLH+G       QN          PW
Sbjct: 205 MMHQQPPPLHQGQQAPPNSQNASSGLQSPLYPW 237


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 95  GAIRYITLKGVTYTSSVE 42
           G I  ITL+GV Y S++E
Sbjct: 195 GEIIEITLRGVLYVSTLE 212


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 64  TPFSVIYLMAPITLRHA*PCAPSTQRRMAHYCQ 162
           T FS+I      + +H  PC  + +  + HY +
Sbjct: 347 TVFSLINTDTDSSKKHPFPCPTTYRTALTHYLE 379


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 176 DVKVKSDAPWHFLVLLHLSTIYFICGLCQ 262
           D+K   D+  H ++L  L+ + F C L Q
Sbjct: 71  DLKSAFDSLPHAILLAKLNKVRFPCSLVQ 99


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 119 HAPPLHKGAWLITARQNTMDVKVK 190
           HAPP H GA    A +  +D ++K
Sbjct: 224 HAPPSHPGAH--RAAEPRLDWRIK 245


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 91  APITLRHA*PCAPSTQRRMAHYCQAKHDGCQS 186
           A +T      C    +  +A   Q KH+GC S
Sbjct: 365 AKVTFDETRGCVVECEGILATVGQWKHEGCSS 396


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 116 SHAPPLHKGAWLITARQNTMDVKVKSD 196
           S  P + +  WL+TA Q+ +     +D
Sbjct: 90  SGLPDITRHPWLVTASQSALQKFASTD 116


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 296,789
Number of Sequences: 2352
Number of extensions: 4835
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 14857014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)