Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_E01
         (267 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1319|AAF46478.1|  372|Drosophila melanogaster CG17438-P...    28   2.1  
AY122228-1|AAM52740.1|  935|Drosophila melanogaster RE27507p pro...    27   4.8  
AE014134-1118|AAF52407.3|  935|Drosophila melanogaster CG11319-P...    27   4.8  
AE014298-2077|AAF48404.1|  633|Drosophila melanogaster CG12398-P...    26   6.3  

>AE014298-1319|AAF46478.1|  372|Drosophila melanogaster CG17438-PA
           protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 124 APSTQRRMAHYCQAKHDGCQSEIGRAVA 207
           AP+ QR+  H CQ K+   Q E+    A
Sbjct: 71  APAAQRKSVHICQHKNAAIQRELAAVAA 98


>AY122228-1|AAM52740.1|  935|Drosophila melanogaster RE27507p
           protein.
          Length = 935

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 143 RLCVEGAHGYA*RSVIGAIRYITLKGVTYTSSVEK*RYITLVPNSI 6
           R+C+  A   + R ++  + + TL   T+T S +K RY+ L  N +
Sbjct: 92  RICLLNAANRSERVLMSNVTFKTLSPFTFTISADK-RYLLLAQNVV 136


>AE014134-1118|AAF52407.3|  935|Drosophila melanogaster CG11319-PA
           protein.
          Length = 935

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 143 RLCVEGAHGYA*RSVIGAIRYITLKGVTYTSSVEK*RYITLVPNSI 6
           R+C+  A   + R ++  + + TL   T+T S +K RY+ L  N +
Sbjct: 92  RICLLNAANRSERVLMSNVTFKTLSPFTFTISADK-RYLLLAQNVV 136


>AE014298-2077|AAF48404.1|  633|Drosophila melanogaster CG12398-PA
           protein.
          Length = 633

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 164 QNTMDVKVKSDAPWHFLVLLHLSTIYFICGLCQ 262
           +N  +V+  SDA W  L   +  TIY   G C+
Sbjct: 534 RNCPEVEYLSDAFWECLARFYSQTIYHPVGTCK 566


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,193,951
Number of Sequences: 53049
Number of extensions: 220477
Number of successful extensions: 426
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 24,988,368
effective HSP length: 67
effective length of database: 21,434,085
effective search space used: 450115785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)