Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E01
(267 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70849-6|ABD63227.1| 284|Caenorhabditis elegans Phosphatidylser... 28 0.79
U70849-5|AAF99922.2| 400|Caenorhabditis elegans Phosphatidylser... 28 0.79
AF125956-8|AAD14728.2| 678|Caenorhabditis elegans Hypothetical ... 28 1.0
AF125956-7|AAX55694.1| 657|Caenorhabditis elegans Hypothetical ... 28 1.0
U80953-3|AAB52554.1| 350|Caenorhabditis elegans Abnormal dauer ... 27 2.4
U72884-1|AAC47389.1| 350|Caenorhabditis elegans DAF-7 protein. 27 2.4
U72883-1|AAC47390.1| 350|Caenorhabditis elegans dauer larva dev... 27 2.4
Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical p... 25 5.6
Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical pr... 25 5.6
AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic s... 25 5.6
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 25 5.6
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 25 5.6
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z71178-9|CAA94883.1| 577|Caenorhabditis elegans Hypothetical pr... 25 9.7
U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical pr... 25 9.7
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 25 9.7
>U70849-6|ABD63227.1| 284|Caenorhabditis elegans Phosphatidylserine
receptor familyprotein 1, isoform b protein.
Length = 284
Score = 28.3 bits (60), Expect = 0.79
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 36 LFFHARCISDPF*RYISNGSYNTASCIAMRPLYTKAHGSLLPGKTRWM 179
LF +A P R+ G + + I + PL T A SLL G RW+
Sbjct: 49 LFHYADDKKRPPHRWFVMGPARSGTAIHIDPLGTSAWNSLLQGHKRWV 96
>U70849-5|AAF99922.2| 400|Caenorhabditis elegans Phosphatidylserine
receptor familyprotein 1, isoform a protein.
Length = 400
Score = 28.3 bits (60), Expect = 0.79
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 36 LFFHARCISDPF*RYISNGSYNTASCIAMRPLYTKAHGSLLPGKTRWM 179
LF +A P R+ G + + I + PL T A SLL G RW+
Sbjct: 165 LFHYADDKKRPPHRWFVMGPARSGTAIHIDPLGTSAWNSLLQGHKRWV 212
>AF125956-8|AAD14728.2| 678|Caenorhabditis elegans Hypothetical
protein DC2.7a protein.
Length = 678
Score = 27.9 bits (59), Expect = 1.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 143 RLCVEGAHGYA*RSVIGAIRYITLKGVTY 57
RL AHGY + +I +RYI KGVT+
Sbjct: 429 RLTSSQAHGYF-KQLIAGLRYIHSKGVTH 456
>AF125956-7|AAX55694.1| 657|Caenorhabditis elegans Hypothetical
protein DC2.7c protein.
Length = 657
Score = 27.9 bits (59), Expect = 1.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 143 RLCVEGAHGYA*RSVIGAIRYITLKGVTY 57
RL AHGY + +I +RYI KGVT+
Sbjct: 429 RLTSSQAHGYF-KQLIAGLRYIHSKGVTH 456
>U80953-3|AAB52554.1| 350|Caenorhabditis elegans Abnormal dauer
formation protein 7 protein.
Length = 350
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 132 RGGAWLCMTQC-YRSH*IYNAKRGHLYI*RGKIKIHNP 22
R A++C C Y +H A+ GH I R K+ NP
Sbjct: 272 RYNAYMCRGDCHYNAHHFNLAETGHSKIMRAAHKVSNP 309
>U72884-1|AAC47389.1| 350|Caenorhabditis elegans DAF-7 protein.
Length = 350
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 132 RGGAWLCMTQC-YRSH*IYNAKRGHLYI*RGKIKIHNP 22
R A++C C Y +H A+ GH I R K+ NP
Sbjct: 272 RYNAYMCRGDCHYNAHHFNLAETGHSKIMRAAHKVSNP 309
>U72883-1|AAC47390.1| 350|Caenorhabditis elegans dauer larva
development regulatorygrowth factor protein.
Length = 350
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 132 RGGAWLCMTQC-YRSH*IYNAKRGHLYI*RGKIKIHNP 22
R A++C C Y +H A+ GH I R K+ NP
Sbjct: 272 RYNAYMCRGDCHYNAHHFNLAETGHSKIMRAAHKVSNP 309
>Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical
protein T05C12.6b protein.
Length = 666
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 110 MHSHAPPLHKGAWLITARQNTMDVK 184
M S PL G W+ TA QNT +K
Sbjct: 323 MASETMPLDVGVWVETAVQNTEKMK 347
>Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical
protein T05C12.6a protein.
Length = 672
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 110 MHSHAPPLHKGAWLITARQNTMDVK 184
M S PL G W+ TA QNT +K
Sbjct: 323 MASETMPLDVGVWVETAVQNTEKMK 347
>AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic
signalling transducer protein.
Length = 666
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 110 MHSHAPPLHKGAWLITARQNTMDVK 184
M S PL G W+ TA QNT +K
Sbjct: 323 MASETMPLDVGVWVETAVQNTEKMK 347
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 121 CAPSTQRRMAHYCQAKHDGCQSEI 192
CAP Q+ A CQ CQS +
Sbjct: 222 CAPQCQQPSAPQCQQCQSACQSPV 245
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 121 CAPSTQRRMAHYCQAKHDGCQSEI 192
CAP Q+ A CQ CQS +
Sbjct: 245 CAPQCQQPSAPQCQQCQSACQSPV 268
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 121 CAPSTQRRMAHYCQAKHDGCQSEI 192
CAP Q+ A CQ CQS +
Sbjct: 346 CAPQCQQPAAPQCQQCQSACQSPV 369
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +1
Query: 121 CAPSTQRRMAHYCQAKHDGCQSEIGRAVALFSIT 222
C P Q+ A CQ CQ+ + A ++T
Sbjct: 309 CTPQCQQPSAPQCQQCQSACQAPVATTAAPQAVT 342
>Z71178-9|CAA94883.1| 577|Caenorhabditis elegans Hypothetical
protein B0024.11 protein.
Length = 577
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 187 HFDIHRVLPGSNEP 146
H+DIH LPG N P
Sbjct: 416 HYDIHIPLPGENLP 429
>U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical
protein T16A1.2 protein.
Length = 786
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 148 AHYCQAKHDGCQSEIGRAVALFSITAPFNHL 240
A C++K D ++ RA LFS FN+L
Sbjct: 28 AGLCRSKLDFTTEKLSRAARLFSSITLFNNL 58
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 121 CAPSTQRRMAHYCQAKHDGCQ 183
CAP Q++ A CQ + CQ
Sbjct: 102 CAPQCQQQFAPACQQCQNSCQ 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,290,518
Number of Sequences: 27780
Number of extensions: 112092
Number of successful extensions: 232
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 12,740,198
effective HSP length: 67
effective length of database: 10,878,938
effective search space used: 228457698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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