Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_E01
         (267 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   1.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   1.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   1.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   1.5  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   1.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   1.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   1.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   1.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   3.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   4.6  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    19   8.0  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 181 DIHRVLPG 158
           DIHRVLPG
Sbjct: 131 DIHRVLPG 138


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 181 DIHRVLPG 158
           DIHRVLPG
Sbjct: 131 DIHRVLPG 138


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 181 DIHRVLPG 158
           DIHRVLPG
Sbjct: 131 DIHRVLPG 138


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 181 DIHRVLPG 158
           DIHRVLPG
Sbjct: 131 DIHRVLPG 138


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 181 DIHRVLPG 158
           DIHRVLPG
Sbjct: 131 DIHRVLPG 138


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 181 DIHRVLPG 158
           DIHRVLPG
Sbjct: 131 DIHRVLPG 138


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 181 DIHRVLPG 158
           DIHRVLPG
Sbjct: 131 DIHRVLPG 138


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 181 DIHRVLPG 158
           DIHRVLPG
Sbjct: 131 DIHRVLPG 138


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 84  SNGSYNTASCIAMRPLYTKAHGSLLP 161
           S GS    S I    L    HG+LLP
Sbjct: 342 SQGSAGLPSAILAMRLSHPLHGNLLP 367


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 4.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 117 LCMTQCYRSH*IYNAKRGHLY 55
           +CM +C R H    A  G +Y
Sbjct: 105 VCMRKCPRRHRPVCASNGKIY 125


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 189 FTLTSIVFCLAVMSHAPLCR 130
           FT+ SIV    ++  AP  R
Sbjct: 493 FTIASIVGTFIILCEAPALR 512


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,545
Number of Sequences: 438
Number of extensions: 1533
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5012760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)