Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_D22
(282 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF101312-3|AAC69219.1| 83|Caenorhabditis elegans Ribosomal pro... 138 6e-34
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 31 0.17
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 31 0.17
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 29 0.51
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 28 1.2
U53180-7|AAA96289.1| 425|Caenorhabditis elegans Hypothetical pr... 27 2.1
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 27 2.7
Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical pr... 25 8.4
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 25 8.4
AF022972-5|AAC48237.1| 523|Caenorhabditis elegans Udp-glucurono... 25 8.4
>AF101312-3|AAC69219.1| 83|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 27 protein.
Length = 83
Score = 138 bits (334), Expect = 6e-34
Identities = 59/77 (76%), Positives = 66/77 (85%)
Frame = +1
Query: 22 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 201
MPLA+DLLHP P E R HKLKRLV HPNSYFMDVKC GC+KI+TVFSHA VVVC GC+
Sbjct: 1 MPLAVDLLHPEPQREIRCHKLKRLVQHPNSYFMDVKCSGCFKISTVFSHATTVVVCVGCN 60
Query: 202 TILCQPTGGRARLTEGC 252
T+LCQPT G+A+LTEGC
Sbjct: 61 TVLCQPTRGKAKLTEGC 77
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 30.7 bits (66), Expect = 0.17
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 52 SPASERRKHKLKRLVPHPNSYFM-DVKCPGCYKITTVFSHAQRVVVCAGCSTILC 213
+P ERR + + + + Y++ D +CP C T F+ R C C +LC
Sbjct: 517 TPRRERRLTESELQLGKTSPYWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLC 571
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 30.7 bits (66), Expect = 0.17
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 52 SPASERRKHKLKRLVPHPNSYFM-DVKCPGCYKITTVFSHAQRVVVCAGCSTILC 213
+P ERR + + + + Y++ D +CP C T F+ R C C +LC
Sbjct: 517 TPRRERRLTESELQLGKTSPYWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLC 571
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 29.1 bits (62), Expect = 0.51
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 43 LHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVC 189
LH +P H +R VP + MD+KCP C+K+ +V+C
Sbjct: 81 LHATPGRLHGHHS-RRSVP---VFMMDMKCPVCHKVVPSDDADIHLVMC 125
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1
Query: 133 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGR 231
P CY+ +VFS R C C I C R
Sbjct: 161 PECYRCRSVFSVFTRKHHCRACGQIFCDKCSSR 193
>U53180-7|AAA96289.1| 425|Caenorhabditis elegans Hypothetical
protein D1014.2 protein.
Length = 425
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 107 FGCGTNLFNLCFLLSDAGEGCNKSIASGMVTA 12
FGCG N+ NL LLS A I + M A
Sbjct: 84 FGCGGNILNLMVLLSRAMRSRTNLIFAAMAFA 115
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 26.6 bits (56), Expect = 2.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +3
Query: 174 EGCCMRRMFHNPLPAHWWP 230
+GCC++ +H P P+ + P
Sbjct: 402 KGCCVKDQYHEPAPSGYHP 420
>Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical
protein B0393.6 protein.
Length = 405
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 130 CPGCYKITTVFSHAQRVVVCAGCSTILC 213
CPGC V HA V+ C+ ++C
Sbjct: 15 CPGCETQYDVRLHAPHVLPCSHTFCLMC 42
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +1
Query: 67 RRKHKLKRLVPHPNSYFMDVKCPGCYKITTVF 162
+++ KLK++VPH F+++K Y +T ++
Sbjct: 190 QKRLKLKKIVPHKILRFLNIKY-SAYYVTFIY 220
>AF022972-5|AAC48237.1| 523|Caenorhabditis elegans
Udp-glucuronosyltransferase protein38 protein.
Length = 523
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 207 DCGTSCAYNNPLCVAKYRSYFVATGTFDI 121
D G + A+ P+ V KYR++ T D+
Sbjct: 43 DAGHNVAFFTPIIVEKYRNFNYTKSTKDV 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,136,039
Number of Sequences: 27780
Number of extensions: 138180
Number of successful extensions: 292
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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