Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D21
         (344 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   0.77 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   2.3  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   2.3  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   2.3  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      20   7.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   7.2  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    20   9.5  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 229 SCC*AGKPRGNSCISSTTPTRTCLE 303
           SCC    P  N+C  S + T  C+E
Sbjct: 162 SCC--NSPENNTCSISNSYTNGCVE 184


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = +2

Query: 173 SKPT*TREPSPP--RHARGVGRVAEQGNREEIRASRQLHPH 289
           ++P    +P PP  R  R     AE GN   +  S+   PH
Sbjct: 72  NRPVYIPQPRPPHPRLRREAELEAEPGNNRPVYISQPRPPH 112



 Score = 21.8 bits (44), Expect = 2.3
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = +2

Query: 173 SKPT*TREPSPP--RHARGVGRVAEQGNREEIRASRQLHPH 289
           ++P    +P PP  R  R     AE GN   +  S+   PH
Sbjct: 128 NRPVYIPQPRPPHPRLRREAELEAEPGNNRPVYISQPRPPH 168


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 135 VLAWTKAKELYS 170
           +L WT A+ELYS
Sbjct: 13  LLTWTYAEELYS 24


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 135 VLAWTKAKELYS 170
           +L WT A+ELYS
Sbjct: 13  LLTWTYAEELYS 24


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 250 PRGNSCISSTTPTRTCLE 303
           PRG S  +  TPT T ++
Sbjct: 151 PRGGSLPTPVTPTPTTVQ 168


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +3

Query: 48  TRQALAEAKAIKEQINILVYVAEMVATDPVLAWTKAKELYSSLSQ 182
           TR+      + KEQ+ +    AE  +T      T  + L+  LSQ
Sbjct: 153 TREVQPHDASEKEQLGLASVKAEPGSTGTTTTSTGTRLLHGILSQ 197


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +2

Query: 197 PSPPRHARGVGRVAEQGNREEIRASRQLHPH 289
           P  PR  R     AE GN   I   +   PH
Sbjct: 55  PPHPRLRREAEPKAEPGNNRPIYIPQPRPPH 85



 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = +2

Query: 197 PSPPRHARGVGRVAEQGNREEIRASRQLHPH 289
           P  PR  R     AE GN   +   +   PH
Sbjct: 83  PPHPRLRREAESEAEPGNNRPVYIPQPRPPH 113


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,084
Number of Sequences: 438
Number of extensions: 2119
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)