Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_D20
(419 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.024
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 33 0.024
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 30 0.17
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 29 0.39
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 29 0.39
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 0.90
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 27 0.90
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 27 1.2
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 26 2.1
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 26 2.1
SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|c... 26 2.1
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 26 2.1
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 26 2.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 2.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 3.6
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 25 3.6
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 3.6
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 25 4.8
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 4.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 4.8
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 25 4.8
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 25 6.3
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 6.3
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 25 6.3
SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|c... 25 6.3
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 25 6.3
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 24 8.4
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 24 8.4
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 24 8.4
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.024
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +3
Query: 6 RVPT-STPSKPTFPAYSNATISAPPTTSTQ---AGGADPKENGEVKPPAANTCPLVTATG 173
RVP+ S P+ P P SN T+S+PP + + +P N KPP V+A
Sbjct: 244 RVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAA 303
Query: 174 AGSKIVHP 197
+ P
Sbjct: 304 LAANKKRP 311
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 32.7 bits (71), Expect = 0.024
Identities = 27/103 (26%), Positives = 40/103 (38%)
Frame = +3
Query: 12 PTSTPSKPTFPAYSNATISAPPTTSTQAGGADPKENGEVKPPAANTCPLVTATGAGSKIV 191
PTS PT P+YS + S PT+ + + A P + T P + T
Sbjct: 1580 PTSPSYSPTSPSYSPTSPSYSPTSPSYS--ATSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 192 HPLEDVSLEEIRARNPKYRPKPKPDAHPTIQAPAQTIITPSTS 320
P + +P Y P P PT +P+ + +PS S
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSP-TSPSYSPT--SPSYSPTSPSYS 1677
Score = 30.3 bits (65), Expect = 0.13
Identities = 27/104 (25%), Positives = 40/104 (38%)
Frame = +3
Query: 9 VPTSTPSKPTFPAYSNATISAPPTTSTQAGGADPKENGEVKPPAANTCPLVTATGAGSKI 188
+P+S PT P+YS + S P TS P + P + T P + T
Sbjct: 1572 MPSSPSYSPTSPSYSPTSPSYSP-TSPSYSPTSPSYSA-TSPSYSPTSPSYSPTSPSYSP 1629
Query: 189 VHPLEDVSLEEIRARNPKYRPKPKPDAHPTIQAPAQTIITPSTS 320
P + +P Y P P PT +P+ + +PS S
Sbjct: 1630 TSPSYSPTSPSYSPTSPSYSP-TSPSYSPT--SPSYSPTSPSYS 1670
Score = 30.3 bits (65), Expect = 0.13
Identities = 27/101 (26%), Positives = 38/101 (37%)
Frame = +3
Query: 12 PTSTPSKPTFPAYSNATISAPPTTSTQAGGADPKENGEVKPPAANTCPLVTATGAGSKIV 191
PTS PT P+YS + S P TS P + P + T P + T
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSP-TSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPT 1714
Query: 192 HPLEDVSLEEIRARNPKYRPKPKPDAHPTIQAPAQTIITPS 314
P + +P Y P P PT +P+ + +PS
Sbjct: 1715 SPSYSPTSPSYSPTSPSYSP-TSPSYSPT--SPSYSPTSPS 1752
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 29.9 bits (64), Expect = 0.17
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + +S T+S ++EP VT V + G+TS F V+VV
Sbjct: 572 VGYTSTFPASGTTSGTVEVVEPTAGTVTETIVSGSVGYTSTFPASGTTSGTVEVV 626
Score = 29.9 bits (64), Expect = 0.17
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + +S T+S ++EP VT V + G+TS F V+VV
Sbjct: 607 VGYTSTFPASGTTSGTVEVVEPTAGTVTETIVSGSVGYTSTFPASGTTSGTVEVV 661
Score = 29.5 bits (63), Expect = 0.22
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + +S T+S ++EP +T V + G+TS F V+VV
Sbjct: 222 VGYTSTFPASGTTSGTVEVVEPTAGTITETIVSGSVGYTSTFPANGTTSGTVEVV 276
Score = 28.7 bits (61), Expect = 0.39
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + ++ T+S ++EP VT V + G+TS F V+VV
Sbjct: 327 VGYTSTFPANGTTSGTVEVVEPTAGTVTETIVSGSVGYTSTFPASGTTSGTVEVV 381
Score = 28.7 bits (61), Expect = 0.39
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + +S T+S ++EP +T V + FTS F V+VV
Sbjct: 362 VGYTSTFPASGTTSGTVEVVEPTAGTITETIVSGSKAFTSTFPANGTTSGTVEVV 416
Score = 28.7 bits (61), Expect = 0.39
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + +S T+S ++EP +T V + FTS F V+VV
Sbjct: 642 VGYTSTFPASGTTSGTVEVVEPTAGTITETIVSGSKAFTSTFPANGTTSGTVEVV 696
Score = 28.3 bits (60), Expect = 0.51
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + ++ T+S ++EP +T V + G+TS F V+VV
Sbjct: 257 VGYTSTFPANGTTSGTVEVVEPTAGTITETIVSGSVGYTSTFPANGTTSGTVEVV 311
Score = 28.3 bits (60), Expect = 0.51
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + ++ T+S ++EP +T V + G+TS F V+VV
Sbjct: 292 VGYTSTFPANGTTSGTVEVVEPTAGTITETIVSGSVGYTSTFPANGTTSGTVEVV 346
Score = 28.3 bits (60), Expect = 0.51
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+ F + I++ DTSS ++EP VT V + FTS V+VV
Sbjct: 782 VSFMSTITAHDTSSGAVIVVEPTAGTVTETIVSGSIPFTSTIPAQGTTSGTVEVV 836
Score = 27.1 bits (57), Expect = 1.2
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -2
Query: 235 FRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
F + +S T+S ++EP +T V + FTS F V+VV
Sbjct: 504 FTSTFPASGTTSGTVEVVEPTAGTITETIVSGSKAFTSTFPANGTTSGTVEVV 556
Score = 27.1 bits (57), Expect = 1.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 235 FRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
F + I + T+S ++EP VT + + G+TS F V+VV
Sbjct: 819 FTSTIPAQGTTSGTVEVVEPTAGTVTETIISGSVGYTSTFPAQGTTSGTVEVV 871
Score = 27.1 bits (57), Expect = 1.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 235 FRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
F + I + T+S ++EP VT + + G+TS F V+VV
Sbjct: 994 FTSTIPAQGTTSGTVEVVEPTAGTVTETIISGSVGYTSTFPAQGTTSGTVEVV 1046
Score = 26.6 bits (56), Expect = 1.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -2
Query: 235 FRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
F + ++ T+S ++EP +T V + G+TS F V+VV
Sbjct: 434 FTSTFPANGTTSGTVEVVEPTAGTITETIVSGSVGYTSTFPANGTTSGTVEVV 486
Score = 26.6 bits (56), Expect = 1.6
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + ++ T+S ++EP +T V + FTS F V+VV
Sbjct: 467 VGYTSTFPANGTTSGTVEVVEPTAGTITETIVSGSKTFTSTFPASGTTSGTVEVV 521
Score = 26.6 bits (56), Expect = 1.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -2
Query: 235 FRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
F + ++ T+S ++EP +T V + G+TS F V+VV
Sbjct: 539 FTSTFPANGTTSGTVEVVEPTAGTITETIVSGSVGYTSTFPASGTTSGTVEVV 591
Score = 26.6 bits (56), Expect = 1.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -2
Query: 235 FRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
F + ++ T+S ++EP +T V + G+TS F V+VV
Sbjct: 714 FTSTFPANGTTSGTVEVVEPTAGTITETIVSGSVGYTSTFPASGTTSGTVEVV 766
Score = 26.6 bits (56), Expect = 1.6
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + + T+S ++EP VT + + G+TS F V++V
Sbjct: 852 VGYTSTFPAQGTTSGTVEVVEPTAGTVTETIISGSVGYTSTFPAQGTTSGTVEIV 906
Score = 26.6 bits (56), Expect = 1.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -2
Query: 235 FRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
F + I + T+S ++EP VT + + G+TS F V++V
Sbjct: 924 FTSTIPAQGTTSGTVEVVEPTAGTVTETIISGSVGYTSTFPAQGTTSGTVEIV 976
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -2
Query: 235 FRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
F + ++ T+S ++EP +T V + FTS F V+VV
Sbjct: 399 FTSTFPANGTTSGTVEVVEPTAGTITKTIVSGSKTFTSTFPANGTTSGTVEVV 451
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -2
Query: 235 FRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
F + ++ T+S ++EP +T V + FTS F V+VV
Sbjct: 679 FTSTFPANGTTSGTVEVVEPTAGTITETIVSGSKTFTSTFPANGTTSGTVEVV 731
Score = 24.6 bits (51), Expect = 6.3
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -2
Query: 223 ISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+S +DTS+ P +T V + G+TS F V+VV
Sbjct: 193 VSINDTSASLSKTTSPTAGTITETIVSGSVGYTSTFPASGTTSGTVEVV 241
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 28.7 bits (61), Expect = 0.39
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +3
Query: 9 VPTSTPSKPTFPAYSNATISAPPT-TSTQAGGADPKENGEVKPPAANTCP-----LVTAT 170
+ +S+ T +Y N+T + PPT TST+A E V A T VTAT
Sbjct: 170 ISSSSTYNSTTSSYHNSTSTPPPTITSTKASTVTSTEATTVTTTTAVTVTATETYTVTAT 229
Query: 171 GAGSKI 188
GS I
Sbjct: 230 NGGSTI 235
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 28.7 bits (61), Expect = 0.39
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 3 TRVPTSTPSKP-TFPAYSNATISAPPTTST 89
T +P STPSKP TF +++ +PP+ ST
Sbjct: 399 TPLPPSTPSKPSTFVRPHSSSTDSPPSPST 428
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 27.5 bits (58), Expect = 0.90
Identities = 29/101 (28%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Frame = +3
Query: 15 TSTPSKPTFPAYSNATISAPPTTSTQAG---GADP-----KENGEVKPP--AANTCPLVT 164
T+ S+PT SN + + +T G G P K + +KP +AN +
Sbjct: 290 TANGSEPT--KKSNRSEQSKTVANTNVGSKNGTTPRSFAQKSSKRIKPTEGSANLNTVTE 347
Query: 165 ATGAGSKIVHPLEDVSLEEIRARNPKYRPKPKPDAHPTIQA 287
TG GS+I V I K KPKP + QA
Sbjct: 348 LTGIGSRIAMNGSSVKASNISTEKSKTIAKPKPAKELSPQA 388
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 27.5 bits (58), Expect = 0.90
Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 3/102 (2%)
Frame = +3
Query: 12 PTSTPSKPTFPAYSNATISAPPTTSTQAGGAD--PKENGEVKPPAANTCPLVTATGAGSK 185
PTS S P +SN+ PP + Q +D EN + K P + G
Sbjct: 4 PTSPTSSPGRHHWSNSKDGMPPEYTNQDPNSDQADNENSDAKAHQPQHSPQHSTENQGHT 63
Query: 186 IVHPLEDVSLEEIRAR-NPKYRPKPKPDAHPTIQAPAQTIIT 308
+ +E + K R P H ++P ++++
Sbjct: 64 GTSDTSSLEMELSKLHPESKQRQLPHSPEHERSRSPIASVVS 105
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 108 PKENGEVKPPAANTCPLVTATGAG-SKIVHPL-EDVSLEEIRARNPKYRP 251
P+E+ A+NT PL SK+ + + EDVS+EE+++R + P
Sbjct: 68 PRESESEGKTASNTSPLSPKKVENLSKLFNDINEDVSIEELKSRFKDHLP 117
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 26.2 bits (55), Expect = 2.1
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +3
Query: 48 YSNATISAPPTTS--TQAGGADPKENGEVKPPAANTCPLVTATGAGSKIVHPLEDVSLEE 221
YS+ T+S T+S + A K + VK N+ T T + KI H + L +
Sbjct: 300 YSSKTLSKRDTSSHYPETLKASSKHSSPVK---GNSSISSTWTPSNLKIYHSKNSMGLMD 356
Query: 222 IRA-----RNPKYRPKPK 260
+ A N KYR KPK
Sbjct: 357 LDALKTVASNSKYRTKPK 374
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 2.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 15 TSTPSKPTFPAYSNATISAPPTTSTQAGGADPKENGEVKPPAANT 149
TST + F AT SAP + +T + + KP A+NT
Sbjct: 218 TSTTANSGFSFGKPATTSAPGSNTTVTPSSSITGTNDSKPAASNT 262
>SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1111
Score = 26.2 bits (55), Expect = 2.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 195 PLEDVSLEEIRARNPKY 245
PLEDV ++E+R + PK+
Sbjct: 51 PLEDVPIDELRKKYPKF 67
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 26.2 bits (55), Expect = 2.1
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 21 TPSKPTFPAYSNATISAPPTTSTQAGGADPKENGEVKPPAANTCPLVTATGAGSKI 188
T S PT P+Y+N T + PT+ + P N A N+ + GA + I
Sbjct: 165 TTSSPTIPSYANRTHTDSPTSLSHRLPNVPDTNALNTVQANNSSTSSLSQGAQTGI 220
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 26.2 bits (55), Expect = 2.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 12 PTSTPSKPTFPAYSNATISAPP 77
P+S ++P P+Y+ T S PP
Sbjct: 66 PSSKATRPYIPSYTRLTYSVPP 87
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 2.7
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +3
Query: 72 PPTTSTQAGGADPKENGEVKPPAANTCPLVTATGAGSKIVHPLEDVSLEEIRARNPKYRP 251
PP+TST AG D G++ P P + + + ++ R + P
Sbjct: 853 PPSTSTTAGWNDAPMLGQL--PMRRAAPSMAPVRSPFPGASSAQPAAMS--RTSSVSTLP 908
Query: 252 KPKPDAHPTIQAPA 293
P P A T APA
Sbjct: 909 PPPPTASMTASAPA 922
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 3.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 3 TRVPTSTPSKPTFPAYSNATISAPPTTSTQAG 98
T + +T P P ++++SAPPTTS G
Sbjct: 876 TIIGGTTTIIPVNPGNPSSSVSAPPTTSFTPG 907
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 25.4 bits (53), Expect = 3.6
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 235 FRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
F + +S+S T S I+EP VT V + G+T+ + V+VV
Sbjct: 456 FTSVVSASGTVSGEHIIVEPTAGVVTETVVSGSVGYTTTYPAHDTVSGTVEVV 508
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + DT S ++EP VT V + G+T+ + V+VV
Sbjct: 489 VGYTTTYPAHDTVSGTVEVVEPTAGVVTETVVSGSVGYTTAYPAHDTVSGTVEVV 543
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + DT S ++EP VT V + G+T+ + V+VV
Sbjct: 524 VGYTTAYPAHDTVSGTVEVVEPTAGVVTETVVSGSVGYTTTYPAHDTVSGTVEVV 578
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + DT S ++EP VT V + G+T+ + V+VV
Sbjct: 559 VGYTTTYPAHDTVSGTVEVVEPTAGVVTETVVSGSVGYTTTYPAHDTVSGTVEVV 613
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + DT S ++EP VT V + G+T+ + V+VV
Sbjct: 594 VGYTTTYPAHDTVSGTVEVVEPTAGVVTETVVSGSVGYTTTYPAHDTVSGTVEVV 648
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + DT S ++EP VT V + G+T+ + V+VV
Sbjct: 629 VGYTTTYPAHDTVSGTVEVVEPTAGVVTETVVSGSVGYTTTYPAHDTVSGTVEVV 683
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + DT S ++EP VT V + G+T+ + V+VV
Sbjct: 664 VGYTTTYPAHDTVSGTVEVVEPTAGVVTETVVSGSVGYTTTYPAHDTVSGTVEVV 718
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -2
Query: 241 LGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAPPACVDVV 77
+G+ + DT S ++EP VT V + G+T+ + V+VV
Sbjct: 699 VGYTTTYPAHDTVSGTVEVVEPTAGVVTETVVSGSVGYTTTYPAHDTVSGTVEVV 753
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.4 bits (53), Expect = 3.6
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = +3
Query: 18 STPSKPTFPAYSNATISAPPTTSTQAGGADPKEN---GEVKPPAANTCPLVTATGAGSKI 188
++PSKP P + PP +++ + N ++ +A +T ++
Sbjct: 299 NSPSKPEIPFRHPTSKPLPPKPLSRSKSSSLSRNQTRSQLNDLSAENDSTSNSTEYDDQL 358
Query: 189 VHPLEDVSLEEIRARNPKYRPKPKPDAHPTIQAP 290
L +++E K PKP P PTIQAP
Sbjct: 359 QSILRSLAIEGDDDEVAKVLPKP-PSV-PTIQAP 390
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.0 bits (52), Expect = 4.8
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 6 RVPTSTPSKPTFPAYSNATISAPPTTSTQAGGADPKE---NGEVKPPAANTCPLVTATGA 176
+ P++T KP+ P S + +AP ST+ A N P+A + ++
Sbjct: 453 KAPSATTDKPSPPVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTTTPSATSFSIINKE-K 511
Query: 177 GSKIVHPLEDVSLEE 221
++ + DV LEE
Sbjct: 512 PARSPNETIDVDLEE 526
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +3
Query: 15 TSTPSKPTFPAYSNATISAPPTTSTQAGGADPKENGEVKPPAANTCPLVTATGAGS 182
T + + + P YSN+++ S+ + + A+NT T TG GS
Sbjct: 284 TGSATVSSSPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGS 339
Score = 24.6 bits (51), Expect = 6.3
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 48 YSNATISAPPTTSTQAGGADPKENGEVKPPAANTCPLVTAT 170
YS+AT S P +T + + PPA++T T T
Sbjct: 163 YSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTSSFSTIT 203
Score = 24.2 bits (50), Expect = 8.4
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +3
Query: 42 PAYSNATISAPPTTSTQAGGADPKENGEVKPPAANTCPLVTATGAGS 182
P YSN+++ S+ + + A+NT T TG GS
Sbjct: 401 PFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASNTTVTFTGTGTGS 447
Score = 24.2 bits (50), Expect = 8.4
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +3
Query: 42 PAYSNATISAPPTTSTQAGGADPKENGEVKPPAANTCPLVTATGAGS 182
P YSN+++ S+ + + A+NT T TG GS
Sbjct: 455 PFYSNSSVIPTSAPSSVSSFTSSNSSYTTTLTASNTTVTFTGTGTGS 501
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.0 bits (52), Expect = 4.8
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 10/62 (16%)
Frame = +3
Query: 15 TSTPSKPTFPAYSNATISAPP---TTSTQAGGADPKENGEVK-------PPAANTCPLVT 164
++TP PT P S ++ S PP +TS+ + P + PP N+ VT
Sbjct: 297 STTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVT 356
Query: 165 AT 170
T
Sbjct: 357 PT 358
Score = 24.6 bits (51), Expect = 6.3
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 15 TSTPSKPTFPAYS-NATISAPPTTSTQAGG 101
++TP PT P S ++T + PP ST + G
Sbjct: 351 STTPVTPTVPPTSTSSTSTPPPPASTSSTG 380
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 25.0 bits (52), Expect = 4.8
Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 2/99 (2%)
Frame = +3
Query: 12 PTSTPSKPTFPAYSNATISAPPTTSTQAGGADPKENGEVKPPAANTCPLVTATGAGSKIV 191
P +TP + A + + S T + P++ PP+A P ++ K+
Sbjct: 360 PLATPPRHPLNATNGTSQSNISTPLPEPTPGQPRKVSGHNPPSARRLPSASSVKFNEKLK 419
Query: 192 HPLEDVSLEEIRARNPKYRPK--PKPDAHPTIQAPAQTI 302
+ + E +A Y D T+ P +TI
Sbjct: 420 NASKQSIQNENKASYSSYEDSEIQNDDETRTVGTPTETI 458
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 24.6 bits (51), Expect = 6.3
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 12 PTSTPSKPTFPAYSNA-TISAPPTTSTQAGGADPKENGE 125
PT+ S+ P Y +A T PPT T + A P ++ E
Sbjct: 346 PTTVSSERNAPPYPSAPTRPTPPTVQTSSSAA-PVDSAE 383
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 24.6 bits (51), Expect = 6.3
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 217 SSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSAP-PACVDVV 77
+S + S ++EP+ VTS + FT+ ++GS P V+V+
Sbjct: 922 ASGSVSGNVEVIEPSGSTVTSTIYSGSESFTTTLAVGSGTIPGTVEVI 969
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 24.6 bits (51), Expect = 6.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 170 RRRLQDSAPSRGRVAGGDPGAESQVPAQTEAGRASHHTGAGA 295
+RRLQ S RVAG G + Q P T + S+ +G +
Sbjct: 326 QRRLQQMLESGVRVAGLSNGEKKQKPVYTNK-KKSNRSGTSS 366
>SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 767
Score = 24.6 bits (51), Expect = 6.3
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 51 SNATISAPPTTSTQAGGADPK-ENGEVKPPA 140
+NA S T AGG+ PK GE PP+
Sbjct: 44 ANANASTAETGKKSAGGSKPKRRRGERIPPS 74
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 24.6 bits (51), Expect = 6.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 27 SKPTFPAYSNATISAPPTTSTQAGGADPKENGEVKPPAA 143
S+P P SN + ++ P+T+ Q+ NGE KP ++
Sbjct: 459 SRPMMPQQSNNSEASIPSTTPQSPSV--VSNGENKPSSS 495
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 24.2 bits (50), Expect = 8.4
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 27 SKPTFPAYSNATISAPPTTSTQAGGADPKENGEVKPPAANTCP 155
S P+ + A IS P P +G+V PPA NT P
Sbjct: 556 SAPSAGRPAAAQISRPAQLFRIPSTNPPPFDGDVCPPACNTPP 598
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 24.2 bits (50), Expect = 8.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 18 STPSKPTFPAYSNATISAPPT 80
STP+ P FP Y+++ PT
Sbjct: 235 STPTAPDFPHYNSSPSELSPT 255
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 24.2 bits (50), Expect = 8.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -2
Query: 253 LGRYLGFRARISSSDTSSRGCTILEPAPVAVTSGHVFAAGGFTSPFSLGSA 101
L Y R ++SSS ++ P+PV+ ++ G F P + GS+
Sbjct: 220 LSLYASPRPQVSSSSITTNATYQNLPSPVSTSTTSSQPYGAFHQPATTGSS 270
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,210,730
Number of Sequences: 5004
Number of extensions: 20809
Number of successful extensions: 204
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 148351622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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