Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_D20
(419 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 25 0.26
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 0.61
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 1.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 1.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 1.1
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 2.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 2.4
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 4.3
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 4.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 5.6
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 5.6
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 5.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 7.5
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 20 9.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 9.9
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 25.4 bits (53), Expect = 0.26
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 21 TPSKPTFPAYSNATISAPPTTSTQAGGADPKENG 122
+P+ A S++T S+PP A G K NG
Sbjct: 512 SPNPRIASAPSSSTSSSPPAKGAAAAGQPSKRNG 545
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.2 bits (50), Expect = 0.61
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 194 PSRGRVAGGDPGA-ESQVPAQTEAGRAS 274
PS+G GG PGA SQ P+Q AS
Sbjct: 42 PSQGPPPGGPPGAPPSQNPSQMMISPAS 69
Score = 23.4 bits (48), Expect = 1.1
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 234 NPKYRPKPK-PDAHPTIQAPAQTIITPST 317
NP P P P P Q P+Q +I+P++
Sbjct: 41 NPSQGPPPGGPPGAPPSQNPSQMMISPAS 69
Score = 20.2 bits (40), Expect = 9.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +3
Query: 249 PKPKPDAHPTIQAP 290
P P+P H + QAP
Sbjct: 21 PGPQPSPHQSPQAP 34
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 1.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -3
Query: 228 PGSPPATRPREGALSWSRRRSPSPAGTCS 142
PG P T+ REG P+ TC+
Sbjct: 400 PGENPVTQKREGGPPTGATTGPNEIVTCT 428
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 1.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -3
Query: 228 PGSPPATRPREGALSWSRRRSPSPAGTCS 142
PG P T+ REG P+ TC+
Sbjct: 420 PGENPVTQKREGGPPTGATTGPNEIVTCT 448
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 1.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -3
Query: 228 PGSPPATRPREGALSWSRRRSPSPAGTCS 142
PG P T+ REG P+ TC+
Sbjct: 369 PGENPVTQKREGGPPTGATTGPNEIVTCT 397
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 22.2 bits (45), Expect = 2.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 253 LGRYLGFRARISSSDTSSR 197
LGR+LGF SSS+ ++R
Sbjct: 220 LGRHLGFLKPDSSSELATR 238
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.2 bits (45), Expect = 2.4
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 243 TWDSAPGSPPATRPREGALSWSRRRSPSP 157
T S P SPP T R+G R P P
Sbjct: 614 TNQSCP-SPPVTTKRDGTQETEERLPPLP 641
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.4 bits (43), Expect = 4.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 10 CRPRPRANPPSQ 45
C P PR PPS+
Sbjct: 392 CSPPPRQTPPSR 403
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 4.3
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 42 PAYSNATISAPPTTSTQAGGADPKENGEVKPPAANTCPLVTATGAGSKIVHPLEDVSLEE 221
PA S +SA T+ST P+ PA++T + +G S ++ D++ +
Sbjct: 823 PASSPRYLSAAATSSTSTS---PR-------PASSTAATLVLSGCPSNMMELQVDIADSQ 872
Query: 222 IRARNPKYRPKPKP 263
K P P P
Sbjct: 873 QPLNLSKKSPSPSP 886
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 5.6
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 210 SLEEIRARNPKYRPKPKPDAHPTIQAPAQTIITP 311
S+E I + N PKP P Q T +TP
Sbjct: 404 SIESITSVNSTSSPKPFPRRATLAQLHNFTTMTP 437
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 5.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 218 GDPGAESQVPAQTEAGRASHHTGAGADDHHTEHEP 322
G P +S + + E + S TG+ ++H TE EP
Sbjct: 289 GSP-RDSPIEPEIEISQNSVSTGSDKENHKTE-EP 321
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.0 bits (42), Expect = 5.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 3 TRVPTSTPSKPTFPAYSNATISAPPTTSTQAGG 101
T TSTP + PA + + +ST +GG
Sbjct: 229 TMATTSTPGSGSLPASPADSGVSDVESSTSSGG 261
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.6 bits (41), Expect = 7.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 81 TSTQAGGADPKENGE 125
TST G DP ENGE
Sbjct: 521 TST-FGNGDPPENGE 534
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 20.2 bits (40), Expect = 9.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 304 MIVCAGACMVGCASGFGLGRYLGFRARISSSDTSSR 197
+++ + +VG GFG LG R + S++ SR
Sbjct: 10 LLLAVFSMLVGGFGGFGGFGGLGGRGKCPSNEIFSR 45
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.2 bits (40), Expect = 9.9
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = +3
Query: 42 PAYSNATISAPPTTSTQAGGADPK 113
PAYS T+S P P+
Sbjct: 1270 PAYSCGTVSVPQQQQLPPSSPQPR 1293
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,055
Number of Sequences: 438
Number of extensions: 1481
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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