Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_D19
(357 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051519-1|AAK92943.1| 343|Drosophila melanogaster GH17661p pro... 29 2.3
AE014296-3486|AAO41282.1| 343|Drosophila melanogaster CG33056-P... 29 2.3
AE014296-3485|AAO41281.1| 343|Drosophila melanogaster CG33056-P... 29 2.3
AE014296-3484|AAN12157.1| 343|Drosophila melanogaster CG33056-P... 29 2.3
AE014296-3483|AAF51686.3| 343|Drosophila melanogaster CG33056-P... 29 2.3
AE014296-3482|AAO41280.1| 320|Drosophila melanogaster CG33056-P... 29 2.3
AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p pro... 27 5.3
AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubuli... 27 5.3
AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA... 27 5.3
BT024205-1|ABC86267.1| 280|Drosophila melanogaster RE43632p pro... 27 7.0
AE014296-2538|AAF49614.1| 499|Drosophila melanogaster CG7764-PA... 27 7.0
>AY051519-1|AAK92943.1| 343|Drosophila melanogaster GH17661p
protein.
Length = 343
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
H I YLVT +LY +T+ DV + +C
Sbjct: 66 HNARFIYYLVTKSSLYEASTYGDVQAALIC 95
>AE014296-3486|AAO41282.1| 343|Drosophila melanogaster CG33056-PE,
isoform E protein.
Length = 343
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
H I YLVT +LY +T+ DV + +C
Sbjct: 66 HNARFIYYLVTKSSLYEASTYGDVQAALIC 95
>AE014296-3485|AAO41281.1| 343|Drosophila melanogaster CG33056-PD,
isoform D protein.
Length = 343
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
H I YLVT +LY +T+ DV + +C
Sbjct: 66 HNARFIYYLVTKSSLYEASTYGDVQAALIC 95
>AE014296-3484|AAN12157.1| 343|Drosophila melanogaster CG33056-PB,
isoform B protein.
Length = 343
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
H I YLVT +LY +T+ DV + +C
Sbjct: 66 HNARFIYYLVTKSSLYEASTYGDVQAALIC 95
>AE014296-3483|AAF51686.3| 343|Drosophila melanogaster CG33056-PA,
isoform A protein.
Length = 343
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
H I YLVT +LY +T+ DV + +C
Sbjct: 66 HNARFIYYLVTKSSLYEASTYGDVQAALIC 95
>AE014296-3482|AAO41280.1| 320|Drosophila melanogaster CG33056-PC,
isoform C protein.
Length = 320
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
H I YLVT +LY +T+ DV + +C
Sbjct: 66 HNARFIYYLVTKSSLYEASTYGDVQAALIC 95
>AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p
protein.
Length = 1351
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 3 RGFVYHPGPHHHLTADKIVVKALSL 77
R FV PGP H +DK++ L +
Sbjct: 223 RPFVAQPGPEKHFVSDKLLTNELKI 247
>AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubulin
ring protein protein.
Length = 1351
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 3 RGFVYHPGPHHHLTADKIVVKALSL 77
R FV PGP H +DK++ L +
Sbjct: 223 RPFVAQPGPEKHFVSDKLLTNELKI 247
>AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA
protein.
Length = 1351
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 3 RGFVYHPGPHHHLTADKIVVKALSL 77
R FV PGP H +DK++ L +
Sbjct: 223 RPFVAQPGPEKHFVSDKLLTNELKI 247
>BT024205-1|ABC86267.1| 280|Drosophila melanogaster RE43632p
protein.
Length = 280
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 238 FIVRVIVSDQP*PRPVTYDWTVQ 306
FI+R++ DQP P+ V W Q
Sbjct: 78 FIIRILFVDQPVPQAVVTSWGAQ 100
>AE014296-2538|AAF49614.1| 499|Drosophila melanogaster CG7764-PA
protein.
Length = 499
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 238 FIVRVIVSDQP*PRPVTYDWTVQ 306
FI+R++ DQP P+ V W Q
Sbjct: 74 FIIRILFVDQPVPQAVVTSWGAQ 96
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,203,062
Number of Sequences: 53049
Number of extensions: 267420
Number of successful extensions: 544
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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