Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_D18
(216 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX538077-1|CAD98001.1| 492|Homo sapiens hypothetical protein pr... 29 3.6
BC024036-1|AAH24036.1| 174|Homo sapiens C20orf27 protein protein. 29 3.6
BC012196-1|AAH12196.1| 174|Homo sapiens C20orf27 protein protein. 29 3.6
AL109804-9|CAC17545.1| 174|Homo sapiens chromosome 20 open read... 29 3.6
AL109804-8|CAI18843.1| 199|Homo sapiens chromosome 20 open read... 29 3.6
AK024220-1|BAB14854.1| 174|Homo sapiens protein ( Homo sapiens ... 29 3.6
AK000557-1|BAA91252.1| 174|Homo sapiens protein ( Homo sapiens ... 29 3.6
AY640580-1|AAT65177.1| 118|Homo sapiens immunoglobulin E variab... 28 4.7
AY640487-1|AAT65096.1| 118|Homo sapiens immunoglobulin E variab... 28 4.7
DQ454771-1|ABE66855.1| 85|Homo sapiens immunoglobulin heavy ch... 27 8.3
DQ454768-1|ABE66852.1| 94|Homo sapiens immunoglobulin heavy ch... 27 8.3
DQ454765-1|ABE66849.1| 100|Homo sapiens immunoglobulin heavy ch... 27 8.3
DQ205162-1|ABB54422.1| 116|Homo sapiens immunoglobulin heavy ch... 27 8.3
DQ005289-1|AAY26938.1| 141|Homo sapiens AF3 non-allergic immuno... 27 8.3
DQ005274-1|AAY26923.1| 129|Homo sapiens AF3 non-allergic immuno... 27 8.3
AJ458384-1|CAD30446.1| 114|Homo sapiens immunoglobulin heavy ch... 27 8.3
>BX538077-1|CAD98001.1| 492|Homo sapiens hypothetical protein
protein.
Length = 492
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 25 NLLYGKSLKDAVTVWVRVASNHFSI 99
N Y SLK +T++V + NHFS+
Sbjct: 89 NTYYSPSLKSRLTIFVDTSKNHFSL 113
>BC024036-1|AAH24036.1| 174|Homo sapiens C20orf27 protein protein.
Length = 174
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 58 VTVWVRVASNHFSIPFFFDGGKCIDA 135
VTV RV H P DG KC+ A
Sbjct: 134 VTVQARVMDRHHGTPMLLDGVKCVGA 159
>BC012196-1|AAH12196.1| 174|Homo sapiens C20orf27 protein protein.
Length = 174
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 58 VTVWVRVASNHFSIPFFFDGGKCIDA 135
VTV RV H P DG KC+ A
Sbjct: 134 VTVQARVMDRHHGTPMLLDGVKCVGA 159
>AL109804-9|CAC17545.1| 174|Homo sapiens chromosome 20 open reading
frame 27 protein.
Length = 174
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 58 VTVWVRVASNHFSIPFFFDGGKCIDA 135
VTV RV H P DG KC+ A
Sbjct: 134 VTVQARVMDRHHGTPMLLDGVKCVGA 159
>AL109804-8|CAI18843.1| 199|Homo sapiens chromosome 20 open reading
frame 27 protein.
Length = 199
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 58 VTVWVRVASNHFSIPFFFDGGKCIDA 135
VTV RV H P DG KC+ A
Sbjct: 159 VTVQARVMDRHHGTPMLLDGVKCVGA 184
>AK024220-1|BAB14854.1| 174|Homo sapiens protein ( Homo sapiens
cDNA FLJ14158 fis, clone NT2RM1001112. ).
Length = 174
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 58 VTVWVRVASNHFSIPFFFDGGKCIDA 135
VTV RV H P DG KC+ A
Sbjct: 134 VTVQARVMDRHHGTPMLLDGVKCVGA 159
>AK000557-1|BAA91252.1| 174|Homo sapiens protein ( Homo sapiens
cDNA FLJ20550 fis, clone KAT11636. ).
Length = 174
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 58 VTVWVRVASNHFSIPFFFDGGKCIDA 135
VTV RV H P DG KC+ A
Sbjct: 134 VTVQARVMDRHHGTPMLLDGVKCVGA 159
>AY640580-1|AAT65177.1| 118|Homo sapiens immunoglobulin E variable
region protein.
Length = 118
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 25 NLLYGKSLKDAVTVWVRVASNHFSI 99
N Y SLK VT+ V + NHFS+
Sbjct: 58 NTYYNPSLKSRVTISVDTSKNHFSL 82
>AY640487-1|AAT65096.1| 118|Homo sapiens immunoglobulin E variable
region protein.
Length = 118
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 25 NLLYGKSLKDAVTVWVRVASNHFSI 99
N Y SLK VT+ V + NHFS+
Sbjct: 58 NTYYNPSLKSRVTISVDTSKNHFSL 82
>DQ454771-1|ABE66855.1| 85|Homo sapiens immunoglobulin heavy
chain variable region protein.
Length = 85
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 25 NLLYGKSLKDAVTVWVRVASNHFSI 99
++ Y SLK VT+ V + NHFS+
Sbjct: 23 SIYYNPSLKSRVTISVDTSKNHFSL 47
>DQ454768-1|ABE66852.1| 94|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 94
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 25 NLLYGKSLKDAVTVWVRVASNHFSI 99
++ Y SLK VT+ V + NHFS+
Sbjct: 32 SIYYNPSLKSRVTISVDTSKNHFSL 56
>DQ454765-1|ABE66849.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 25 NLLYGKSLKDAVTVWVRVASNHFSI 99
++ Y SLK VT+ V + NHFS+
Sbjct: 38 SIYYNPSLKSRVTISVDTSKNHFSL 62
>DQ205162-1|ABB54422.1| 116|Homo sapiens immunoglobulin heavy chain
variable region VH protein.
Length = 116
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 34 YGKSLKDAVTVWVRVASNHFSIPFF 108
Y SLK VT+ V + N FS+ FF
Sbjct: 60 YNPSLKSRVTISVDTSRNQFSLKFF 84
>DQ005289-1|AAY26938.1| 141|Homo sapiens AF3 non-allergic
immunoglobulin epsilon heavy chain variable region
protein.
Length = 141
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 25 NLLYGKSLKDAVTVWVRVASNHFSI 99
N Y SLK VT+ V + NHFS+
Sbjct: 56 NTNYNPSLKSRVTISVDTSKNHFSL 80
>DQ005274-1|AAY26923.1| 129|Homo sapiens AF3 non-allergic
immunoglobulin epsilon heavy chain variable region
protein.
Length = 129
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 25 NLLYGKSLKDAVTVWVRVASNHFSI 99
N Y SLK VT+ V + NHFS+
Sbjct: 56 NTNYNPSLKSRVTISVDTSKNHFSL 80
>AJ458384-1|CAD30446.1| 114|Homo sapiens immunoglobulin heavy chain
protein.
Length = 114
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 25 NLLYGKSLKDAVTVWVRVASNHFSI 99
N Y SLK VT+ V + NHFS+
Sbjct: 54 NTYYNPSLKSRVTMSVDTSKNHFSL 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,337,059
Number of Sequences: 237096
Number of extensions: 653088
Number of successful extensions: 4070
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4070
length of database: 76,859,062
effective HSP length: 50
effective length of database: 65,004,262
effective search space used: 1365089502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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