Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D18
         (216 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   2.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   3.8  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              19   5.1  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    19   5.1  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    19   5.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    19   5.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   5.1  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              19   6.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   8.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   8.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       19   8.8  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 75  AYPYCY 58
           AYPYCY
Sbjct: 217 AYPYCY 222


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 201 EKCPFTYCIGRL 166
           +KCPFT  +G L
Sbjct: 196 DKCPFTEHLGYL 207


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 60  NSMGTRRIK 86
           NSMG RR+K
Sbjct: 112 NSMGKRRVK 120


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 139 TLPIALVRPESPN 177
           TLP  L RP+S N
Sbjct: 625 TLPCLLPRPKSEN 637


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 139 TLPIALVRPESPN 177
           TLP  L RP+S N
Sbjct: 593 TLPCLLPRPKSEN 605


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 120 PPVKKKRDG 94
           PPV  KRDG
Sbjct: 621 PPVTTKRDG 629


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 142 LPIALVRPESPNAIGKGAF 198
           +P   +RPES  AIG  +F
Sbjct: 645 IPEEFLRPESGWAIGAMSF 663


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 150 CISETGVSQ 176
           C+ ETG SQ
Sbjct: 33  CVGETGTSQ 41


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 112 DGGKCIDALTLPIALVRPESPNAIG 186
           D G  ID     I +  PE  N +G
Sbjct: 341 DSGYLIDEYGKKIDIYTPEGLNMLG 365


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 112 DGGKCIDALTLPIALVRPESPNAIG 186
           D G  ID     I +  PE  N +G
Sbjct: 341 DSGYLIDEYGKKIDIYTPEGLNMLG 365


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 197 NAPLPIALGDSGL 159
           NA L  ALGDS +
Sbjct: 614 NANLQAALGDSNM 626


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,157
Number of Sequences: 438
Number of extensions: 1149
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)