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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D17
         (465 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272...   190   6e-49
07_01_0578 + 4295386-4296489,4297394-4297507                          186   8e-48
10_02_0199 + 6668902-6669293,6669825-6669882                           35   0.028
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239...    34   0.049
03_05_0366 - 23505755-23506441                                         31   0.46 
11_01_0338 + 2522698-2523213                                           31   0.60 
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662...    30   1.1  
07_03_1721 - 29023979-29025295                                         29   1.4  
05_05_0047 + 21860127-21860735,21862600-21863451                       29   1.4  
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722...    29   1.8  
12_02_0634 + 21416205-21416954                                         29   2.4  
06_02_0233 + 13315579-13316046                                         29   2.4  
03_02_0538 + 9299639-9300046,9300362-9300509,9300648-9300652,930...    29   2.4  
02_04_0457 + 23093020-23093343,23093798-23093806                       29   2.4  
12_02_0488 + 19587337-19587648,19587739-19587798,19587876-195879...    28   3.2  
04_04_0232 + 23794109-23794399,23795290-23796621                       28   3.2  
11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875...    28   4.3  
04_01_0208 + 2596110-2596928                                           28   4.3  
03_01_0092 - 731069-731434,731569-733080                               28   4.3  
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389...    27   5.6  
04_01_0588 + 7657510-7657992,7658397-7658843                           27   5.6  
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113...    27   5.6  
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703...    27   7.4  
03_02_0769 + 11029923-11030172,11030442-11030569,11030892-110311...    27   7.4  
02_02_0183 + 7576901-7576908,7577666-7578176                           27   7.4  
12_02_0828 - 23502276-23503472,23503568-23504002,23504097-235042...    27   9.8  
10_06_0151 + 11276554-11276916,11277020-11277403                       27   9.8  
09_06_0153 - 21243108-21245660                                         27   9.8  
09_02_0384 - 8294914-8297817                                           27   9.8  
07_01_1064 + 9385330-9385432,9386181-9386236,9386938-9387082,938...    27   9.8  
01_01_0077 - 585670-585787,585921-586687                               27   9.8  

>03_06_0298 -
           32925441-32925998,32926371-32926730,32927161-32927230,
           32927642-32927797,32929181-32929242,32929339-32929352,
           32930421-32930520,32931474-32932574
          Length = 806

 Score =  190 bits (462), Expect = 6e-49
 Identities = 88/129 (68%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
 Frame = +1

Query: 82  SVARPLVSVYSEKSEVVA-GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 258
           + ARPLVSV + + ++    A + +P V +APIRPD+V   H  +S N RQPY VS+ AG
Sbjct: 3   AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62

Query: 259 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQ 438
           HQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHRRVN+R 
Sbjct: 63  HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRL 122

Query: 439 RRAAVADAV 465
           RR AVA A+
Sbjct: 123 RRIAVASAL 131


>07_01_0578 + 4295386-4296489,4297394-4297507
          Length = 405

 Score =  186 bits (453), Expect = 8e-48
 Identities = 87/127 (68%), Positives = 102/127 (80%), Gaps = 2/127 (1%)
 Frame = +1

Query: 91  RPLVSVYSEKSEVVA--GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 264
           RPLVSV + + ++     +SL L  VF+AP+RPD+V  VH  +S N RQPY VS+ AGHQ
Sbjct: 6   RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65

Query: 265 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRR 444
           TSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WHRRVN+  RR
Sbjct: 66  TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRR 125

Query: 445 AAVADAV 465
            AVA A+
Sbjct: 126 VAVASAL 132


>10_02_0199 + 6668902-6669293,6669825-6669882
          Length = 149

 Score = 35.1 bits (77), Expect = 0.028
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 211 MSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 381
           +++ A      ++E G    A+SW TGRA A + R R GG  R    A  N   G R
Sbjct: 18  LARAAASSVAANREGGG--GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72


>06_02_0298 +
           13921310-13921834,13921923-13922063,13923601-13923951,
           13924071-13924130,13924261-13924380,13924569-13924718
          Length = 448

 Score = 34.3 bits (75), Expect = 0.049
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 377 PPRHMLPNAPCPDLWVPPP 321
           PPRH++P  P P  WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325


>03_05_0366 - 23505755-23506441
          Length = 228

 Score = 31.1 bits (67), Expect = 0.46
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 157 FVFKAPIRPDLVNDVHVSMSKNAR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 333
           ++  AP   D   +V  S +   R  P C S E   + +AES  TG A  R  R+  G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167

Query: 334 HRSGQGA 354
           + + + A
Sbjct: 168 NDNDEEA 174


>11_01_0338 + 2522698-2523213
          Length = 171

 Score = 30.7 bits (66), Expect = 0.60
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 308 IRATARPVPQDSALV**PASLLTQ*GWRAFFDIDTWTSLTRSGLMGALNTNGRGSEA 138
           +R+ ARP+P+ +AL   P+S        A   I +  +  R G+M A    G   EA
Sbjct: 68  VRSAARPIPETAALTLVPSSSAAAMAKSAPVRIPSEAAAARRGVMWAAQAGGEDGEA 124


>10_08_0894 -
           21365629-21365766,21365849-21365950,21366042-21366284,
           21366685-21366813,21366999-21367103,21367196-21367387,
           21367486-21367639,21368148-21368209,21368291-21368437,
           21368517-21368564,21369091-21369228,21369305-21369451,
           21370579-21370665,21370754-21370861,21370941-21371041,
           21371870-21371996,21372820-21372936,21373029-21373106,
           21373240-21373284,21373637-21373756,21373838-21373964,
           21374033-21374253,21374347-21374529,21374772-21374924,
           21375051-21375146,21375226-21375331,21375410-21375492,
           21375576-21375728,21375819-21376058,21376367-21376414,
           21376782-21376928,21377007-21377115,21377200-21377345,
           21377715-21377809,21377944-21378049,21378177-21378368,
           21378456-21378686,21378772-21378866,21379426-21379529,
           21380040-21380284,21380300-21380347,21380376-21380480,
           21380630-21380767,21381458-21381649,21381738-21381914,
           21382001-21382129,21382203-21382316,21382407-21382746,
           21382836-21383064,21383155-21383455,21384311-21384358,
           21387963-21388355
          Length = 2493

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
 Frame = +1

Query: 166 KAPIRPDLVNDVHVSMSKNARQPYCVSKEA---GHQTSAESWGTGRAVARIPRVRGGGTH 336
           +A  R D  +D +V+  +  R+    +  A   G + S    G      R+    GGG  
Sbjct: 40  EAAARADGDDDGYVARRRRGREGKAEATTAARGGGRRSGRGRGWDERWRRLGFFGGGGRG 99

Query: 337 RSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAAVADA 462
           R G+G  G   RG R       WRR  RR   R+R   V D+
Sbjct: 100 RGGRGGRG---RGARGAGGGGAWRR--RRERGRERMRGVDDS 136


>07_03_1721 - 29023979-29025295
          Length = 438

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 404 HGLVGANIRPPRHMLPNAPCPDLWVP-PPRTRGIRATARPV 285
           +G+VG +  PP H +P  P P    P  P   GI A A PV
Sbjct: 227 NGIVGHSGVPPMHPIPCFPGPPFVYPWSPAWNGIPAMAPPV 267


>05_05_0047 + 21860127-21860735,21862600-21863451
          Length = 486

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 351 CIR*HVPRRTYVRADQAVEALAPSREPTAETCCRGRRR 464
           C+   VPR+TY  + +  EAL  S    A   CR R R
Sbjct: 322 CVTYSVPRKTYGMSSRLPEALTASPVKAAVALCRERDR 359


>12_02_0030 +
           12469707-12469902,12470337-12470658,12472208-12472245,
           12472486-12473573
          Length = 547

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = +1

Query: 283 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAA 450
           G G   A + RV GGG+   G+GA   +  G       + W     R    +RR A
Sbjct: 84  GAGGRGAGVRRVEGGGSGAVGEGARAAVLGGAATIGARRLWAGGAARGGFGRRRGA 139


>12_02_0634 + 21416205-21416954
          Length = 249

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
 Frame = +1

Query: 244 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP-WRRWHR 420
           S +AG    A    TG A        GG      +   G   RG       KP WRRW R
Sbjct: 157 SCDAGRGGGAAGGCTGEAGGA---AGGGRLGEKRRATAGRQLRGSPRETEGKPGWRRWRR 213

Query: 421 RVNLRQR 441
           R   R+R
Sbjct: 214 RWRRRRR 220


>06_02_0233 + 13315579-13316046
          Length = 155

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = +1

Query: 313 RVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRR 444
           R RG   H +G   FG    GGR+ A  +   RW RR   R+RR
Sbjct: 60  RGRGRRPHPAGTAVFGGGV-GGRLSAERR--SRWQRRPARRERR 100


>03_02_0538 +
           9299639-9300046,9300362-9300509,9300648-9300652,
           9302886-9303290,9303379-9304608
          Length = 731

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 139 ASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSK--EAGHQT 267
           ASL +P  F+ PI  DL+ D  +  +    +  C+ +  EAGH T
Sbjct: 295 ASLIVPDDFRCPISLDLMKDPVIVATGQTYERGCIERWLEAGHDT 339


>02_04_0457 + 23093020-23093343,23093798-23093806
          Length = 110

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 360
           G + S   W  G A A    VRGGG  RSG G  G
Sbjct: 76  GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109


>12_02_0488 +
           19587337-19587648,19587739-19587798,19587876-19587941,
           19588017-19588082,19588253-19588345
          Length = 198

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 166 KAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 279
           K  ++ D  N++  + SK  R    VSK   H  SAES
Sbjct: 80  KRKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAES 117


>04_04_0232 + 23794109-23794399,23795290-23796621
          Length = 540

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 388 APTKPWRRWHRRVNLRQRRAAVAD 459
           A   PW RW R    R+RR   AD
Sbjct: 77  AALSPWLRWFREAGARERREGHAD 100


>11_06_0209 +
           21282079-21282369,21287029-21287137,21287462-21287580,
           21287722-21287829,21287943-21288062,21288838-21289011,
           21289111-21289212
          Length = 340

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +1

Query: 160 VFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRA---VARIPRVRGGG 330
           VF  PIR D+V+ V    +K   +     ++  +Q      GTGRA     R P+ RGG 
Sbjct: 160 VFDVPIRKDIVHRVGTHSTKTISEVSGTGRKPYNQK-----GTGRARHGTLRGPQFRGGA 214

Query: 331 T 333
           T
Sbjct: 215 T 215


>04_01_0208 + 2596110-2596928
          Length = 272

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
 Frame = +1

Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF-GNMCRGGRMFAPTKP-WRRWHRRVN 429
           G +   E    GR         GGG     + A  G   R        +P WRRW RR  
Sbjct: 123 GCEAEGEDGAAGRRSGEEGEAAGGGRRGGKRRAMAGTRLRRSPCETEGRPGWRRWRRRWR 182

Query: 430 LRQR 441
            R+R
Sbjct: 183 RRRR 186


>03_01_0092 - 731069-731434,731569-733080
          Length = 625

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 374 PRHMLPNAPCPDLWVPPPRTRGIRATARPVP 282
           P H++P  P P L  P P+++      R  P
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAP 297


>07_01_0524 +
           3892340-3894625,3894995-3895109,3895204-3895298,
           3895929-3896167,3896524-3896610,3896967-3897066,
           3897908-3898115,3898224-3899422
          Length = 1442

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
 Frame = +1

Query: 250 EAGHQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGRMFAPTKP-WR 408
           E G    ++    G++V +  + R+R    H  G G+ G++ +   GG+M  P  P WR
Sbjct: 74  EGGGSDKSKGSEVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGKMLRPGFPKWR 132


>04_01_0588 + 7657510-7657992,7658397-7658843
          Length = 309

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
 Frame = +1

Query: 193 NDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGN 363
           +D+    ++ +R    +   +  ++S+  W  G    R+  +    GGG  R      G 
Sbjct: 201 HDIQWGDNQPSRSSGVLPSSSEWRSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGL 260

Query: 364 MCRGGRMFAPTKPWRRW 414
                    P  PWRRW
Sbjct: 261 GWASSWFGRPNLPWRRW 277


>02_01_0163 +
           1135592-1135623,1135718-1135816,1135904-1135960,
           1136053-1136116,1136174-1136392,1138562-1138945
          Length = 284

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 329 PPPRTRGIRATARPVPQDSA 270
           PPPRTR +     PVP  SA
Sbjct: 166 PPPRTRQVNPAPPPVPSPSA 185


>12_01_1024 -
           10467644-10469274,10469424-10469482,10469820-10470357,
           10470975-10471666,10471912-10472062,10473797-10473864,
           10473964-10474042,10474763-10474765,10476427-10477255
          Length = 1349

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = +1

Query: 262 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 441
           +  A  +G  + V  +PR     T R  Q AF          +PT P R     ++ R R
Sbjct: 41  EPEASRYGICKIVPPLPRPPEDDTFRRLQAAFAAAASSNGDPSPTFPTRLQQVGLSARNR 100

Query: 442 RAA 450
           RAA
Sbjct: 101 RAA 103


>03_02_0769 +
           11029923-11030172,11030442-11030569,11030892-11031137,
           11031302-11031557,11031665-11031888
          Length = 367

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +1

Query: 127 VVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVAR 306
           VVAG  +P  FVF   +     N+  VS+SK    P  +  + GHQ +   +  GR +  
Sbjct: 24  VVAGGGMPATFVFGDSLVDAGNNNYLVSLSKANYPPNGIDFD-GHQPTGR-YTNGRTIVD 81

Query: 307 I 309
           I
Sbjct: 82  I 82


>02_02_0183 + 7576901-7576908,7577666-7578176
          Length = 172

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 21/66 (31%), Positives = 22/66 (33%)
 Frame = +1

Query: 226 RQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 405
           RQP       G   +    GTG   A      GGG    G G  G     G        W
Sbjct: 76  RQPLARCDRRGGAEAEGGDGTGDVEAE----GGGGGGGGGVGWMGMRRAEGGGSGSVARW 131

Query: 406 RRWHRR 423
           RRW RR
Sbjct: 132 RRWRRR 137


>12_02_0828 -
           23502276-23503472,23503568-23504002,23504097-23504213,
           23505330-23505396,23505685-23505725,23506161-23506237,
           23506699-23506945
          Length = 726

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 322 GGGTHRSGQGAFGNMCRGGRMFAPTKP 402
           GGG   +G GA     RGG   AP +P
Sbjct: 49  GGGGGGAGAGAARRRARGGARAAPARP 75


>10_06_0151 + 11276554-11276916,11277020-11277403
          Length = 248

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -2

Query: 206 TWTSLTRSGLMGALNTNGRGSEAPATT---SLFSEYTDTKGRATDRLI 72
           TWTS+   G  G   +NG G+ A + +   S  +E+TDT   A DR +
Sbjct: 11  TWTSVPGEGGGGGGRSNGGGTAAESDSRELSFDAEHTDT---ALDRYV 55


>09_06_0153 - 21243108-21245660
          Length = 850

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 372 RRTYVRADQAVEALAPSREPTAETCCRGRR 461
           +  Y  +DQA+E +AP +E     C  G R
Sbjct: 445 KEAYACSDQALEHMAPDKELRMLACVHGAR 474


>09_02_0384 - 8294914-8297817
          Length = 967

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 97  LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSK 219
           LV +Y   S  V     PLP + + PIR  LV  +H+++ K
Sbjct: 116 LVDLYDRGSFEVVSVDGPLPSIEEKPIREKLVG-MHLNVMK 155


>07_01_1064 +
           9385330-9385432,9386181-9386236,9386938-9387082,
           9387126-9387298,9388058-9388129,9388222-9388336,
           9388418-9388521,9388604-9388645,9388932-9389144,
           9389621-9389689
          Length = 363

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +1

Query: 181 PDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIP 312
           PD++ + H+ + KN R       +A        +G G  VA++P
Sbjct: 63  PDVIQNYHLCVVKNRRLDSDTIAKASQMKIIMQYGVGLEVAQLP 106


>01_01_0077 - 585670-585787,585921-586687
          Length = 294

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 426 HATVPAPPRLGRREHTSAAA 367
           H  VP PP+LGRR   + AA
Sbjct: 23  HPPVPPPPKLGRRAALAIAA 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,392,009
Number of Sequences: 37544
Number of extensions: 326735
Number of successful extensions: 1450
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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