Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_D16
(337 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93380-4|CAB07597.1| 339|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z93388-2|CAB07659.1| 369|Caenorhabditis elegans Hypothetical pr... 26 5.8
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 26 5.8
U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical p... 26 5.8
AF067219-10|AAC17031.1| 753|Caenorhabditis elegans Hypothetical... 26 5.8
AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transport... 26 5.8
AF003133-2|AAB54136.1| 753|Caenorhabditis elegans Hypothetical ... 26 5.8
Z83104-5|CAC35810.1| 570|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 26 7.7
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 26 7.7
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 26 7.7
U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical pr... 26 7.7
U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical pr... 26 7.7
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 26 7.7
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 26 7.7
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 26 7.7
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 26 7.7
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 26 7.7
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut... 26 7.7
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 26 7.7
AB012700-1|BAA89795.1| 570|Caenorhabditis elegans FLR-4 protein. 26 7.7
>Z93380-4|CAB07597.1| 339|Caenorhabditis elegans Hypothetical
protein F28C12.5 protein.
Length = 339
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -1
Query: 181 RHNDVSFSIHSDTAPTKFSAIPYSFTGLHFTVAKTATKASFFHIF*YFYSQLVLHLPTLV 2
R +D F +HS FS YS L F + K+ F+H YF + +L L L+
Sbjct: 105 RSSDCVFELHSYYLTGYFST--YSVCSLAFDRLVSHYKSKFYHTHQYFIAVSLLVLQLLL 162
>Z93388-2|CAB07659.1| 369|Caenorhabditis elegans Hypothetical
protein T10C6.2 protein.
Length = 369
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -1
Query: 268 PVLIKDMPSKIFISFDTANLSVNLRAFSLRHNDVSFSIHSDTAPTKFSAIPY 113
P+L P + AN+S + L+ +SF + +D PT F PY
Sbjct: 275 PILFMQFPMTLIYITCLANISTSFFG-KLQQLTISFYLATDALPTIFIIKPY 325
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 26.2 bits (55), Expect = 5.8
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 150 EC-IEKDTSLCLKEKALKFTERLAVSKDMNIFEGMSLINTGSARSARSYEPLAEE 311
EC + K TSL K K+ + ++LAV K M++ + + + A SYE +EE
Sbjct: 359 ECFLLKMTSLEEKLKSAEEDKKLAVKKAMSLVKELQKSLKEERKRADSYERKSEE 413
>U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical
protein D1044.1 protein.
Length = 382
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 232 ISFDTANLSVNLRAFSLRHNDVSFSIHSDTAPTKFSAIPYSF-TGLHFTVAKTATKASFF 56
+ N N + + L H +F H TAP FS + S+ T +F A + S++
Sbjct: 288 LGLSVENRRANTQRY-LNHYYTTFKSHFSTAPFTFSQLEESYRTHFNFVNATSLFSLSYY 346
Query: 55 H 53
+
Sbjct: 347 Y 347
>AF067219-10|AAC17031.1| 753|Caenorhabditis elegans Hypothetical
protein R12E2.10 protein.
Length = 753
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 135 LNFPRYRIPLPGCTSLLPKRRPKPVSSTFFNIFIH 31
L P Y+ P+ L +RRP + + IF+H
Sbjct: 621 LRGPTYKYPVQRAVQFLRQRRPFSIETPMQYIFVH 655
>AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transporter
family protein 2 protein.
Length = 1551
Score = 26.2 bits (55), Expect = 5.8
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 48 KMWKKLALVAVLATVKCNPVKEYGIAENLVG--AVSECIEKDTSLCLKEKALKFTERLAV 221
K+W + + + + ++Y I +G ++ + K S L + ALKFT+ LAV
Sbjct: 868 KIWPGFPIASNILSNALLRQEDYAIDPEDLGILTMNHPMNKTISQTLDQNALKFTQALAV 927
Query: 222 SKDMNIFEGMSLINTG 269
+ + +S+I G
Sbjct: 928 FRITILLLVLSMIPAG 943
>AF003133-2|AAB54136.1| 753|Caenorhabditis elegans Hypothetical
protein T21E3.1 protein.
Length = 753
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 135 LNFPRYRIPLPGCTSLLPKRRPKPVSSTFFNIFIH 31
L P Y+ P+ L +RRP + + IF+H
Sbjct: 621 LRGPTYKYPVQRAVQFLRQRRPFSIETPMQYIFVH 655
>Z83104-5|CAC35810.1| 570|Caenorhabditis elegans Hypothetical
protein F09B12.6 protein.
Length = 570
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 81 KRRPKPVSSTFFNIFIHNSYFICR 10
K+R KP S+ IF+ + Y++ R
Sbjct: 390 KKRSKPKSNNIMQIFVASGYYLSR 413
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 277 RAEPVLIKDMPSKIFISFDTANLSVNLRAFSLRHNDVSFSIHSDTAPTKF 128
R+EP++ ++ ++ T LS+N + + + FS+ S PT+F
Sbjct: 869 RSEPLVPDELAPELLKEAQTQLLSLNAQVVAAQLTLQDFSVFSAIEPTEF 918
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 277 RAEPVLIKDMPSKIFISFDTANLSVNLRAFSLRHNDVSFSIHSDTAPTKF 128
R+EP++ ++ ++ T LS+N + + + FS+ S PT+F
Sbjct: 869 RSEPLVPDELAPELLKEAQTQLLSLNAQVVAAQLTLQDFSVFSAIEPTEF 918
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 277 RAEPVLIKDMPSKIFISFDTANLSVNLRAFSLRHNDVSFSIHSDTAPTKF 128
R+EP++ ++ ++ T LS+N + + + FS+ S PT+F
Sbjct: 869 RSEPLVPDELAPELLKEAQTQLLSLNAQVVAAQLTLQDFSVFSAIEPTEF 918
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 277 RAEPVLIKDMPSKIFISFDTANLSVNLRAFSLRHNDVSFSIHSDTAPTKF 128
R+EP++ ++ ++ T LS+N + + + FS+ S PT+F
Sbjct: 869 RSEPLVPDELAPELLKEAQTQLLSLNAQVVAAQLTLQDFSVFSAIEPTEF 918
>U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical
protein F46F11.9b protein.
Length = 1282
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = -3
Query: 167 IFFNTLGHCTD*IFRDTVFLYRVALHCCQNGDQSQFLPHFLIFLFTTRTSSADP 6
+ L CTD ++ L+R L C + + H+L +F T +P
Sbjct: 79 VLIQALKTCTD--VSQSIKLFRDVLARCSEPSEHESFGHYLACIFVVSTEDENP 130
>U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical
protein F46F11.9a protein.
Length = 1280
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = -3
Query: 167 IFFNTLGHCTD*IFRDTVFLYRVALHCCQNGDQSQFLPHFLIFLFTTRTSSADP 6
+ L CTD ++ L+R L C + + H+L +F T +P
Sbjct: 79 VLIQALKTCTD--VSQSIKLFRDVLARCSEPSEHESFGHYLACIFVVSTEDENP 130
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 277 RAEPVLIKDMPSKIFISFDTANLSVNLRAFSLRHNDVSFSIHSDTAPTKF 128
R+EP++ ++ ++ T LS+N + + + FS+ S PT+F
Sbjct: 746 RSEPLVPDELAPELLKEAQTQLLSLNAQVVAAQLTLQDFSVFSAIEPTEF 795
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 277 RAEPVLIKDMPSKIFISFDTANLSVNLRAFSLRHNDVSFSIHSDTAPTKF 128
R+EP++ ++ ++ T LS+N + + + FS+ S PT+F
Sbjct: 869 RSEPLVPDELAPELLKEAQTQLLSLNAQVVAAQLTLQDFSVFSAIEPTEF 918
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 277 RAEPVLIKDMPSKIFISFDTANLSVNLRAFSLRHNDVSFSIHSDTAPTKF 128
R+EP++ ++ ++ T LS+N + + + FS+ S PT+F
Sbjct: 869 RSEPLVPDELAPELLKEAQTQLLSLNAQVVAAQLTLQDFSVFSAIEPTEF 918
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +3
Query: 105 VKEYGIAENLVGAVSECIEKDTSLCLKE 188
VKEY + E ++G S+ E+D ++ +++
Sbjct: 371 VKEYSVDEIILGMASQIAERDDNIVVED 398
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 277 RAEPVLIKDMPSKIFISFDTANLSVNLRAFSLRHNDVSFSIHSDTAPTKF 128
R+EP++ ++ ++ T LS+N + + + FS+ S PT+F
Sbjct: 869 RSEPLVPDELAPELLKEAQTQLLSLNAQVVAAQLTLQDFSVFSAIEPTEF 918
>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered
cuticle protein 3 protein.
Length = 1497
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +3
Query: 105 VKEYGIAENLVGAVSECIEKDTSLCLKE 188
VKEY + E ++G S+ E+D ++ +++
Sbjct: 371 VKEYSVDEIILGMASQIAERDDNIVVED 398
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +3
Query: 105 VKEYGIAENLVGAVSECIEKDTSLCLKE 188
VKEY + E ++G S+ E+D ++ +++
Sbjct: 381 VKEYSVDEIILGMASQIAERDDNIVVED 408
>AB012700-1|BAA89795.1| 570|Caenorhabditis elegans FLR-4 protein.
Length = 570
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 81 KRRPKPVSSTFFNIFIHNSYFICR 10
K+R KP S+ IF+ + Y++ R
Sbjct: 390 KKRSKPKSNNIMQIFVASGYYLSR 413
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,854,651
Number of Sequences: 27780
Number of extensions: 159190
Number of successful extensions: 431
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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