Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D13
         (278 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    25   0.71 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    22   3.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           21   8.7  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 114 ININANELFQHPRPILQPGDPLV*TPPPGGAQL 16
           I+INA  + +  +  L+ GDP +    PGGA+L
Sbjct: 892 IDINAKLITETGQRSLKRGDPSLLYRGPGGAEL 924


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 36  PPGGAQLCS 10
           PPGG +LCS
Sbjct: 638 PPGGGELCS 646


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 87  QHPRPILQPGDPLV*TPPPGGAQLCSLS 4
           Q P+  + P D +   PP G   L S S
Sbjct: 816 QSPKNAVAPSDIIFDRPPAGQTTLMSYS 843


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,033
Number of Sequences: 2352
Number of extensions: 4066
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16604898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)