Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D13
         (278 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M33882-1|AAA36458.1|  662|Homo sapiens protein ( Human p78 prote...    29   2.0  
M30817-1|AAA36337.1|  662|Homo sapiens interferon-induced Mx pro...    29   2.0  
BC032602-1|AAH32602.1|  662|Homo sapiens myxovirus (influenza vi...    29   2.0  
BC014222-1|AAH14222.2|  578|Homo sapiens MX1 protein protein.          29   2.0  
AY186254-1|AAO31807.1|   83|Homo sapiens MxA protein.                  29   2.0  
AL163285-3|CAB90556.1|  662|Homo sapiens human interferon-regula...    29   2.0  
AK093008-1|BAC04017.1|  662|Homo sapiens protein ( Homo sapiens ...    29   2.0  
AF135187-1|AAD43063.1|  662|Homo sapiens interferon-induced prot...    29   2.0  

>M33882-1|AAA36458.1|  662|Homo sapiens protein ( Human p78 protein
           mRNA, complete cds. ).
          Length = 662

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 24  LHRVAASKLVDPPAAESDEGAEIIRLRLYLFEI 122
           LHR A SK+ D  A +  EG ++IRL   + +I
Sbjct: 498 LHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQI 530


>M30817-1|AAA36337.1|  662|Homo sapiens interferon-induced Mx
           protein protein.
          Length = 662

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 24  LHRVAASKLVDPPAAESDEGAEIIRLRLYLFEI 122
           LHR A SK+ D  A +  EG ++IRL   + +I
Sbjct: 498 LHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQI 530


>BC032602-1|AAH32602.1|  662|Homo sapiens myxovirus (influenza
           virus) resistance 1, interferon-inducible protein p78
           (mou protein.
          Length = 662

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 24  LHRVAASKLVDPPAAESDEGAEIIRLRLYLFEI 122
           LHR A SK+ D  A +  EG ++IRL   + +I
Sbjct: 498 LHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQI 530


>BC014222-1|AAH14222.2|  578|Homo sapiens MX1 protein protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 24  LHRVAASKLVDPPAAESDEGAEIIRLRLYLFEI 122
           LHR A SK+ D  A +  EG ++IRL   + +I
Sbjct: 414 LHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQI 446


>AY186254-1|AAO31807.1|   83|Homo sapiens MxA protein.
          Length = 83

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 24  LHRVAASKLVDPPAAESDEGAEIIRLRLYLFEI 122
           LHR A SK+ D  A +  EG ++IRL   + +I
Sbjct: 13  LHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQI 45


>AL163285-3|CAB90556.1|  662|Homo sapiens human interferon-regulated
           resistance GTP-bindingNA 2900024C23 gene protein.
          Length = 662

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 24  LHRVAASKLVDPPAAESDEGAEIIRLRLYLFEI 122
           LHR A SK+ D  A +  EG ++IRL   + +I
Sbjct: 498 LHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQI 530


>AK093008-1|BAC04017.1|  662|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35689 fis, clone SPLEN2019379, highly similar to
           INTERFERON-REGULATED RESISTANCE GTP-BINDING PROTEIN MXA.
           ).
          Length = 662

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 24  LHRVAASKLVDPPAAESDEGAEIIRLRLYLFEI 122
           LHR A SK+ D  A +  EG ++IRL   + +I
Sbjct: 498 LHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQI 530


>AF135187-1|AAD43063.1|  662|Homo sapiens interferon-induced protein
           p78 protein.
          Length = 662

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 24  LHRVAASKLVDPPAAESDEGAEIIRLRLYLFEI 122
           LHR A SK+ D  A +  EG ++IRL   + +I
Sbjct: 498 LHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQI 530


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,437,959
Number of Sequences: 237096
Number of extensions: 619575
Number of successful extensions: 890
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1325771524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)