Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_D12
(296 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024817-18|AAK68533.1| 342|Caenorhabditis elegans C-type lecti... 30 0.26
U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical pr... 30 0.34
U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical pr... 30 0.34
AC024817-15|AAU05552.1| 281|Caenorhabditis elegans Hypothetical... 29 0.60
Z92782-11|CAE17813.1| 382|Caenorhabditis elegans Hypothetical p... 27 1.8
Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical p... 27 3.2
Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical p... 27 3.2
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 27 3.2
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 27 3.2
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 27 3.2
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 27 3.2
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 27 3.2
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 27 3.2
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 27 3.2
Z48621-6|CAA88544.1| 238|Caenorhabditis elegans Hypothetical pr... 25 7.4
L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF040655-1|AAK84577.2| 678|Caenorhabditis elegans Hypothetical ... 25 9.7
>AC024817-18|AAK68533.1| 342|Caenorhabditis elegans C-type lectin
protein 81 protein.
Length = 342
Score = 30.3 bits (65), Expect = 0.26
Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 HEETLLT*YLNDRLGRSSSINDHKNC-TKFFYHVQSVP 112
+++T+LT Y+ D G S+ +NDH+N T F+ ++ +P
Sbjct: 199 NDKTMLTGYI-DNYGYSAGLNDHQNYPTDDFFDLRGIP 235
>U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2a protein.
Length = 393
Score = 29.9 bits (64), Expect = 0.34
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +1
Query: 10 NFTDVIFERPLRSFVLDQRSQKLHQIFLSRP 102
NF DV LR FVLD S KLH+ F P
Sbjct: 327 NFEDVNVPGKLREFVLDLHSGKLHREFHHGP 357
>U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2b protein.
Length = 393
Score = 29.9 bits (64), Expect = 0.34
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +1
Query: 10 NFTDVIFERPLRSFVLDQRSQKLHQIFLSRP 102
NF DV LR FVLD S KLH+ F P
Sbjct: 327 NFEDVNVPGKLREFVLDLHSGKLHREFHHGP 357
>AC024817-15|AAU05552.1| 281|Caenorhabditis elegans Hypothetical
protein Y54G2A.37 protein.
Length = 281
Score = 29.1 bits (62), Expect = 0.60
Identities = 13/38 (34%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 HEETLLT*YLNDRLGRSSSINDHKNC-TKFFYHVQSVP 112
+++T+LT Y+ D G S+ +NDH+N T + ++ ++P
Sbjct: 140 NDKTMLTGYI-DNFGYSTGLNDHENYPTDHYNNLNNIP 176
>Z92782-11|CAE17813.1| 382|Caenorhabditis elegans Hypothetical
protein F14F8.11 protein.
Length = 382
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 155 KFNFDVSTNFLIAIEVLIGR 96
KF+ D S NFL++ EV +G+
Sbjct: 13 KFDADESNNFLVSFEVFVGK 32
>Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical
protein F17C11.7b protein.
Length = 515
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 25 IFERPLRSFVLDQRSQKLHQIFLSRPISTSIAIKKFVLTSKLNFNLQVPTYPTSTRASM 201
+FER L S RS K+H I + I+T+ + + F L +P S + S+
Sbjct: 232 VFERKLGSQCKVARSSKIHVIGTTGEITTTDVKNLTTINGEEPFELYIPITDISMKQSV 290
>Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical
protein F17C11.7a protein.
Length = 531
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 25 IFERPLRSFVLDQRSQKLHQIFLSRPISTSIAIKKFVLTSKLNFNLQVPTYPTSTRASM 201
+FER L S RS K+H I + I+T+ + + F L +P S + S+
Sbjct: 248 VFERKLGSQCKVARSSKIHVIGTTGEITTTDVKNLTTINGEEPFELYIPITDISMKQSV 306
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 252 SWRTSPVLRRRGSGRAVHTGSRRSWIS 172
SW +LR G+G A T R W++
Sbjct: 823 SWLRQKILRTEGAGSANTTEKRNGWVN 849
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 252 SWRTSPVLRRRGSGRAVHTGSRRSWIS 172
SW +LR G+G A T R W++
Sbjct: 847 SWLRQKILRTEGAGSANTTEKRNGWVN 873
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 252 SWRTSPVLRRRGSGRAVHTGSRRSWIS 172
SW +LR G+G A T R W++
Sbjct: 833 SWLRQKILRTEGAGSANTTEKRNGWVN 859
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 252 SWRTSPVLRRRGSGRAVHTGSRRSWIS 172
SW +LR G+G A T R W++
Sbjct: 838 SWLRQKILRTEGAGSANTTEKRNGWVN 864
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 252 SWRTSPVLRRRGSGRAVHT 196
S R S LRR GSG++VHT
Sbjct: 670 STRPSSKLRRSGSGKSVHT 688
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 252 SWRTSPVLRRRGSGRAVHT 196
S R S LRR GSG++VHT
Sbjct: 673 STRPSSKLRRSGSGKSVHT 691
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 252 SWRTSPVLRRRGSGRAVHT 196
S R S LRR GSG++VHT
Sbjct: 670 STRPSSKLRRSGSGKSVHT 688
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 252 SWRTSPVLRRRGSGRAVHTGSRRSWIS 172
SW +LR G+G A T R W++
Sbjct: 479 SWLRQKILRTEGAGSANTTEKRNGWVN 505
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 252 SWRTSPVLRRRGSGRAVHTGSRRSWIS 172
SW +LR G+G A T R W++
Sbjct: 543 SWLRQKILRTEGAGSANTTEKRNGWVN 569
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 252 SWRTSPVLRRRGSGRAVHTGSRRSWIS 172
SW +LR G+G A T R W++
Sbjct: 838 SWLRQKILRTEGAGSANTTEKRNGWVN 864
>Z48621-6|CAA88544.1| 238|Caenorhabditis elegans Hypothetical
protein R07B1.7 protein.
Length = 238
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +3
Query: 159 PTGADLSNFDESQYELLCLNRDAGGRDSFSNYATCNIAMS 278
PTG D Q ++ L A D+ N TC I S
Sbjct: 174 PTGCQACTLDSVQQIMISLGTKAFTSDTIDNSGTCAIRTS 213
>L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical
protein C30A5.10a protein.
Length = 505
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 174 LSNFDESQYELLCLNRDAGGRDSFSNYAT 260
L F S ++ N D GG +SFS Y T
Sbjct: 467 LKQFWSSAFKCHVDNEDMGGSNSFSRYIT 495
>AF040655-1|AAK84577.2| 678|Caenorhabditis elegans Hypothetical
protein T24E12.5 protein.
Length = 678
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 244 NESRPPASRFRQSSSYWLSSKLD 176
NE+R + FR+S SYW + D
Sbjct: 173 NENRTGSPVFRKSDSYWYEPEKD 195
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 244 NESRPPASRFRQSSSYWLSSKLD 176
NE+R + FR+S SYW + D
Sbjct: 236 NENRTGSPVFRKSDSYWYEPEKD 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,036,820
Number of Sequences: 27780
Number of extensions: 130430
Number of successful extensions: 301
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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