Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D12
         (296 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   0.46 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   0.80 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   0.80 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   0.80 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   0.80 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   4.2  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       20   7.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    19   9.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   9.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    19   9.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 0.46
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 245 ERVPSSGVAVQAEQFILALVEVG*VGTCRLKFNFDVSTNFLIAI 114
           +R+P   +  Q +Q  L    V  V   RL   FD  TN +I +
Sbjct: 254 KRIPGFSLLAQDDQVTLLKAGVFEVLLVRLACMFDAQTNSMICL 297


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 0.80
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 228 GGRDSFSNYATCNIAMSPSRTWL 296
           GGR   + +  CN+ + P R  L
Sbjct: 615 GGRAEINEWERCNLGLEPPRVIL 637


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 0.80
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 228 GGRDSFSNYATCNIAMSPSRTWL 296
           GGR   + +  CN+ + P R  L
Sbjct: 615 GGRAEINEWERCNLGLEPPRVIL 637


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 0.80
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 228 GGRDSFSNYATCNIAMSPSRTWL 296
           GGR   + +  CN+ + P R  L
Sbjct: 615 GGRAEINEWERCNLGLEPPRVIL 637


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 0.80
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 275 HGYVTCGIVGERVP 234
           HG VT G++G R P
Sbjct: 900 HGPVTAGVIGARKP 913


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 231 GRDSFSNYATCNIAMSPSRTWL 296
           G+  FS+Y   N+ +  S  WL
Sbjct: 274 GKKEFSHYEHQNVFVKNSGQWL 295


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 177 SNFDESQYELLCLN 218
           SN++ + Y+ LC N
Sbjct: 92  SNYNNNNYKQLCYN 105


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 177 SNFDESQYELLCLN 218
           SN++ + Y+ LC N
Sbjct: 92  SNYNNNNYKQLCYN 105


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 177 SNFDESQYELLCLN 218
           SN++ + Y+ LC N
Sbjct: 92  SNYNNNNYKQLCYN 105


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 177 SNFDESQYELLCLN 218
           SN++ + Y+ LC N
Sbjct: 92  SNYNNNNYKQLCYN 105


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 177 SNFDESQYELLCLN 218
           SN++ + Y+ LC N
Sbjct: 92  SNYNNNNYKQLCYN 105


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 177 SNFDESQYELLCLN 218
           SN++ + Y+ LC N
Sbjct: 92  SNYNNNNYKQLCYN 105


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +2

Query: 38  RLGRSSSINDHKNCTKFFYHVQSVP 112
           R+GR+  + +    T FF   +  P
Sbjct: 538 RIGRTGRVGNRGRATSFFDPEEDAP 562


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 272 GYVTCGIVGERVP 234
           G V  G++G R+P
Sbjct: 517 GEVVTGVIGHRMP 529


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +2

Query: 44  GRSSSINDHKNCTKFFYHVQSVPQ*QLKSLC 136
           GR S       CTKF  H  S+      S C
Sbjct: 489 GRDSDSRLLDLCTKFLMHKDSLGLSTATSTC 519


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 272 GYVTCGIVGERVP 234
           G V  G++G R+P
Sbjct: 517 GEVVTGVIGHRMP 529


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,687
Number of Sequences: 438
Number of extensions: 1422
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)