Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_D11
(196 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0178 + 11280174-11280342,11280429-11280497,11281494-112817... 32 0.074
09_03_0216 - 13529869-13530894 30 0.23
03_05_0781 + 27654764-27655429,27655902-27656004,27656535-276565... 29 0.39
11_04_0221 + 15021145-15022497 29 0.52
01_05_0034 + 17409592-17409837,17409893-17409928 28 0.91
01_01_0749 - 5794140-5794346,5795445-5795558,5795856-5796008,579... 28 0.91
09_02_0136 + 4747985-4748419 28 1.2
08_01_0312 + 2764744-2767390,2767632-2767990 28 1.2
02_05_1162 - 34593101-34594624 28 1.2
03_05_0424 + 24107009-24107138,24107381-24107784 27 1.6
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669... 27 2.1
02_04_0028 + 19027510-19027983,19028087-19028278,19028369-190285... 27 2.1
01_01_0316 + 2565704-2566134,2566682-2566845,2566989-2567152,256... 27 2.1
11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690... 27 2.8
04_03_0181 - 12327281-12328620,12330922-12331015,12331079-123311... 27 2.8
03_02_0440 - 8500068-8501252 27 2.8
08_01_1002 + 10171942-10172859,10173369-10173452 26 3.7
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 26 3.7
06_01_0824 - 6219477-6219556,6220427-6220808,6221415-6221448,622... 26 3.7
04_04_1397 - 33230416-33230742,33230852-33231007,33231130-332315... 26 3.7
03_02_0810 + 11429776-11429985,11430003-11430935 26 3.7
12_02_0378 + 18349089-18350402,18351109-18351155,18351266-18351368 26 4.9
05_07_0238 + 28597399-28598286 26 4.9
05_07_0089 - 27619053-27620138 26 4.9
05_04_0060 + 17576427-17578781 26 4.9
05_04_0019 + 17197271-17197445,17197937-17198067,17198129-171981... 26 4.9
05_01_0425 - 3347604-3347708,3348394-3348466,3349917-3350581,335... 26 4.9
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 26 4.9
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 25 6.4
10_08_0251 - 16188603-16188944 25 6.4
03_01_0222 - 1756769-1756801,1756889-1756917,1756975-1757859,175... 25 6.4
02_05_0686 - 30900748-30902167,30903442-30904742 25 6.4
10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,543... 25 8.5
09_04_0507 + 18194320-18195081 25 8.5
09_04_0344 + 16870922-16871035,16871200-16872054 25 8.5
09_04_0343 - 16831789-16832643,16832782-16832826 25 8.5
05_02_0049 - 6083364-6084111,6084140-6084246 25 8.5
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 25 8.5
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 25 8.5
02_05_0849 + 32202610-32202880,32204234-32205711,32205993-322061... 25 8.5
01_07_0295 - 42577779-42578330 25 8.5
01_05_0383 + 21667798-21668079 25 8.5
>11_03_0178 +
11280174-11280342,11280429-11280497,11281494-11281703,
11282314-11282435,11282436-11282633
Length = 255
Score = 31.9 bits (69), Expect = 0.074
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 34 GTRPGVKRPEIPTKNPRVRPPH-LGWGHHGFRSHRVAPCGEP 156
G P V R P + P + H GWG + +H PCGEP
Sbjct: 93 GVSPPVLRRREPRQGPGLEMRHGRGWGQR-YHTHGQLPCGEP 133
>09_03_0216 - 13529869-13530894
Length = 341
Score = 30.3 bits (65), Expect = 0.23
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 189 PHWAIARTRPGGFAAGGDAVTAKAVVPPSQMRRTDPG 79
PH +I R+R G D T VVPP++ R DPG
Sbjct: 10 PHRSIDRSRSGSSLDARDGGTG-LVVPPARRARRDPG 45
>03_05_0781 +
27654764-27655429,27655902-27656004,27656535-27656590,
27656895-27657059,27657078-27657083,27657657-27657770,
27658170-27658262
Length = 400
Score = 29.5 bits (63), Expect = 0.39
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -2
Query: 189 PHWAIARTRPGGFAAGGDAVTAKAVVPPSQMRRTDPGVFSGYFRALHARASP 34
PH A GG GG A ++++ PPS T P GY A SP
Sbjct: 117 PHHGAALAASGG-RVGGSAFSSRSSSPPSSYGYTAPAPRGGYSAAPFYSPSP 167
>11_04_0221 + 15021145-15022497
Length = 450
Score = 29.1 bits (62), Expect = 0.52
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 24 VPVWDSPGREAPGNTH*KPPGPSAAFGMG 110
V WDSP R+AP T PP ++ +G
Sbjct: 327 VAEWDSPARDAPRTTPPPPPPVHVSYHLG 355
>01_05_0034 + 17409592-17409837,17409893-17409928
Length = 93
Score = 28.3 bits (60), Expect = 0.91
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 127 CESRGAPIPNAADGPGGF*WVFPGASRPGESHTGTETSLRLV 2
C G AADG PGA+R + H GTE+ +RL+
Sbjct: 48 CRGGGGKGVAAADGDQQQQQHAPGAARKQQEHHGTESMVRLL 89
>01_01_0749 -
5794140-5794346,5795445-5795558,5795856-5796008,
5796124-5796207,5796262-5796399,5796500-5796598
Length = 264
Score = 28.3 bits (60), Expect = 0.91
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +2
Query: 68 PLKTPGSVRRIWDGGTTAFAVTASPPAANPPGLVRA 175
PL+ P VRR G TT TA+P AA P L RA
Sbjct: 93 PLQVPSLVRRY--GSTTGATATATP-AAGVPALHRA 125
>09_02_0136 + 4747985-4748419
Length = 144
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2
Query: 144 GGDAVTAKAVVPPSQMRRTDPGVFSGYFRALHARASPTLVRRR 16
GGDAV VV P ++ T G +G R L A + RR
Sbjct: 31 GGDAVDESGVVEPREVVATSTGAQAGRQRRLEAAGAEEREGRR 73
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -3
Query: 143 GATR*LRKPWCPHP--KCGGRTRGFLVGI 63
GATR L PWC P C G T G +VG+
Sbjct: 57 GATRSLAPPWCAWPGVACDGAT-GEVVGV 84
>02_05_1162 - 34593101-34594624
Length = 507
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 110 GTTAFAVTASPPAANPPGLVRAMAQWG 190
G+ A A A+PP PP VR M +G
Sbjct: 22 GSEAAAAQAAPPPPAPPAKVRLMVSYG 48
>03_05_0424 + 24107009-24107138,24107381-24107784
Length = 177
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 1 ARGEGTSPYQCGTRPGVKRPEIPTKNPRVRP 93
A G TSP QC R + PE T P RP
Sbjct: 115 AEGWPTSPTQCRHRRPSRPPETTTATPSSRP 145
>04_03_0849 +
20265511-20265984,20266452-20266617,20266694-20266905,
20267154-20267647,20267732-20267780,20267922-20268251
Length = 574
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 195 PHPHWAIARTRPGGFAAGGDAVTAKAVVP 109
P P A RPGG AAGG +V A P
Sbjct: 36 PGPRHDHAVKRPGGEAAGGRSVNGAAPAP 64
>02_04_0028 +
19027510-19027983,19028087-19028278,19028369-19028545,
19029568-19029663,19030487-19030618,19030950-19031008,
19031234-19031321,19031433-19031693
Length = 492
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +1
Query: 1 ARGEGTSPYQCGTRPGVKRPEIPTKNPRVRPPHLGWGHHGFRSHRVAPCGEPT 159
A EG + RP RP T+ P RPP WG + AP G T
Sbjct: 29 AAAEGGAVASQPPRPPQPRPGT-TRPPLWRPPRWPWGSSSSAATAAAPGGAST 80
>01_01_0316 +
2565704-2566134,2566682-2566845,2566989-2567152,
2567594-2567720,2568347-2568450
Length = 329
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 46 GVKRPEIPTKNPRVRPPHLGWGHHGFRSHRVAPCGEPTGPRP 171
G +RP+ P ++ P H G HH RS P P+ RP
Sbjct: 25 GQERPKAPRRHGSHGPGHYG-NHHHHRSRPPPPPPPPSEFRP 65
>11_05_0050 +
18665251-18665613,18667280-18667744,18668548-18669037,
18669115-18669143
Length = 448
Score = 26.6 bits (56), Expect = 2.8
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Frame = +1
Query: 13 GTSPYQCGTRPGVKRPEIPTKNPRVRPPHLGWGHHGFRSHRVAPCGEP-----TGPRPCN 177
G SP + PTK+P + PPH RS+ CGE P+P +
Sbjct: 363 GESPSTQHLSNATTEAKTPTKSPIMPPPHGSGSPFTPRSNPCYRCGEDGHWSRNCPKPAS 422
Query: 178 GPM 186
P+
Sbjct: 423 SPL 425
>04_03_0181 -
12327281-12328620,12330922-12331015,12331079-12331183,
12331404-12332592,12333268-12333461
Length = 973
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 53 SARKYPLKTPGSVRRIWDGGTTAFAVTASPPAANPP 160
S+R P P R + TTA A + PPA PP
Sbjct: 168 SSRTQPFPKPTLARVKSERATTAAAASPRPPALAPP 203
>03_02_0440 - 8500068-8501252
Length = 394
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 104 DGGTTAFAVTASPPAANPPGL 166
DGG A ASPP A PP L
Sbjct: 141 DGGAEEVAARASPPRAFPPPL 161
>08_01_1002 + 10171942-10172859,10173369-10173452
Length = 333
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 96 RRTDPGVFSGYFRALHARA 40
R +PGVF G RA++ARA
Sbjct: 132 RADEPGVFPGVGRAIYARA 150
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 26.2 bits (55), Expect = 3.7
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +1
Query: 1 ARGEGTSPYQCGTRPGVKRPEIPTKNPRVRPPHLGWGHHGFRSHRVAPCGEPTGP-RPCN 177
A GT+ G + R + ++ R R L G R HR EPT P +P
Sbjct: 394 ATDSGTTTATAGAQHEAMREQEKREDHRSRDSELRPGESDRRDHRPESRAEPTPPAQPSG 453
Query: 178 GPMG 189
P G
Sbjct: 454 KPDG 457
>06_01_0824 -
6219477-6219556,6220427-6220808,6221415-6221448,
6222214-6222370,6224449-6224575,6224663-6224914
Length = 343
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 159 GGFAAGGDAVTAKAVVPPSQMRRTDPGVFSGYFRALHARASPTLV 25
G A AVT AV+PP+Q + T P A H A P V
Sbjct: 233 GYMPAPAPAVTPTAVLPPAQQQITGPPPPFVQQPAQHVTAPPPFV 277
>04_04_1397 -
33230416-33230742,33230852-33231007,33231130-33231543,
33234177-33234307,33235076-33235202,33235709-33236209,
33237624-33237935,33238690-33238719
Length = 665
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 29 SVGLARA*SARKYPLKTPGSVRRIWDGGTTAFA--VTASPPAANPPGL 166
SV R + R++PL+ P R W G A + AS PGL
Sbjct: 298 SVAAVRVRAVRRWPLRIPARTNREWAVGRKAMSGDSGASRKRKTAPGL 345
>03_02_0810 + 11429776-11429985,11430003-11430935
Length = 380
Score = 26.2 bits (55), Expect = 3.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 7 GEGTSPYQCGTRPGVKRPEIP 69
G T PY C + P +P++P
Sbjct: 292 GNATGPYTCFSAPSQAKPDVP 312
>12_02_0378 + 18349089-18350402,18351109-18351155,18351266-18351368
Length = 487
Score = 25.8 bits (54), Expect = 4.9
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -3
Query: 95 GGRTRGFLVGISGRFTP---GRVPHWYGDVPSP 6
GG RG + G SGR TP G PH Y P+P
Sbjct: 159 GGGGRG-VGGGSGRATPSFPGSSPHHYPSTPTP 190
>05_07_0238 + 28597399-28598286
Length = 295
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 103 GWGHHGFRSHRVAPCGEPTGPRPCNGPMG 189
G GH R A CG + P NGP G
Sbjct: 119 GAGHDALLDRRCANCGTASTPLWRNGPRG 147
>05_07_0089 - 27619053-27620138
Length = 361
Score = 25.8 bits (54), Expect = 4.9
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -2
Query: 177 IARTRPGGFAAGGDAVTAKAVVPPSQMRRTDPGVFSGYFRALHARASPT 31
++R +PGG AAGG A + PS G+FS H SPT
Sbjct: 1 MSRAQPGGAAAGGGGA---ARLKPSPRALFSCGIFS---TCTHPALSPT 43
>05_04_0060 + 17576427-17578781
Length = 784
Score = 25.8 bits (54), Expect = 4.9
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 162 PGGFAAGGDAVTAKAVVPPSQMRRTDPGVFSGYFRALHARASPTLVRRRPF 10
PGG GG A P+++R + GV SG+ L + RRR F
Sbjct: 80 PGGGGGGGGEERAS----PTRIRHSYTGVVSGFAATLTRGEVAAVSRRRGF 126
>05_04_0019 +
17197271-17197445,17197937-17198067,17198129-17198164,
17198196-17198333,17198503-17198601,17198750-17199124
Length = 317
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 119 PWCPHPKCGGRTRGFLVGISGRFTP 45
P P P G GFL G++GR P
Sbjct: 288 PVSPEPPRQGAAGGFLCGLTGRANP 312
>05_01_0425 -
3347604-3347708,3348394-3348466,3349917-3350581,
3350609-3351088,3351253-3351534
Length = 534
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +2
Query: 101 WDGGTTAFAVTASPPAANPPGLVRAMAQW 187
W+GG AVTA AA PG VR A W
Sbjct: 156 WNGGEAVGAVTAQQEAA--PG-VRGAAAW 181
>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
26643948-26644120,26644227-26644308,26644623-26644758,
26644777-26644833,26644905-26645120,26645939-26646335,
26646458-26646544,26647063-26647324,26648892-26648972,
26649176-26650350
Length = 1221
Score = 25.8 bits (54), Expect = 4.9
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
Frame = -3
Query: 125 RKPWCPHPKCGGR---TRGFLVGIS--GRF--TPGRVPH 30
R P P CGGR +RG VG+S GR TPG+ PH
Sbjct: 1048 RMPRPQQPNCGGRPGSSRGGAVGLSAAGRMLETPGQ-PH 1085
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 25.4 bits (53), Expect = 6.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 16 TSPYQCGTRPGVKRPEIPTKNPRVRPPHLGWGHHGFRSHRVAPC 147
T P Q GT P V ++ N +V+ + G HG + R A C
Sbjct: 35 TEPPQDGTAPPVVTSDMEVLNDKVKKQVIKEG-HGKKPSRFATC 77
>10_08_0251 - 16188603-16188944
Length = 113
Score = 25.4 bits (53), Expect = 6.4
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +1
Query: 7 GEGTSPYQCGTRPGVKRPEIPTKNPRVRPPHLGWGHHGFRSHRVAPCGEPT 159
GEGT + RP P + PR+R P GWG P GEPT
Sbjct: 63 GEGTD-WSREIRPQRWVPLERCRRPRLRTPARGWGR---------PSGEPT 103
>03_01_0222 -
1756769-1756801,1756889-1756917,1756975-1757859,
1758244-1759273,1759354-1759401,1759626-1760480
Length = 959
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 71 VGISGRFTPGRVPHWYGDV 15
+G+ GR GRVP W DV
Sbjct: 205 LGLPGRVFVGRVPEWTPDV 223
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 59 RKYPLKTPGSVRRIWDGGTTAFAVTASPPA 148
R Y L+ GS+ + DGG A + T+ P+
Sbjct: 669 RNYSLRRSGSLAKSTDGGNPAASSTSQGPS 698
>10_02_0114 +
5431578-5431724,5432753-5432797,5433572-5433691,
5433773-5433880,5434900-5435073,5435366-5435503,
5435879-5435986,5436131-5436238,5436340-5436488,
5437594-5437747,5437980-5438140,5438221-5438427,
5438575-5438758,5438846-5438929,5439023-5439222,
5439314-5439373,5439461-5439665
Length = 783
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 113 CPHPKCGGRTRGFLVGISGRFTPGRVPHWYG 21
C P CG T L+ + ++ G P W+G
Sbjct: 465 CRDPSCGDATTEGLIKVRPAYSFGVDPVWHG 495
>09_04_0507 + 18194320-18195081
Length = 253
Score = 25.0 bits (52), Expect = 8.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 68 PLKTPGSVRRIWDGGTTAFAVTASPPAANPPGLVRAMAQWG 190
PLKT G + D A + SP A P G A A+ G
Sbjct: 74 PLKTMGMDMDMLDDDDDGAAPSKSPAATAPAGAAAAPAEEG 114
>09_04_0344 + 16870922-16871035,16871200-16872054
Length = 322
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 167 RGPVGSPQGATR*LRKPWCPHP 102
RGP G+P T+ P CP P
Sbjct: 153 RGPAGAPTFGTKVSSYPPCPRP 174
>09_04_0343 - 16831789-16832643,16832782-16832826
Length = 299
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 167 RGPVGSPQGATR*LRKPWCPHP 102
RGP G+P T+ P CP P
Sbjct: 130 RGPAGAPTFGTKVSSYPPCPRP 151
>05_02_0049 - 6083364-6084111,6084140-6084246
Length = 284
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 147 AGGDAVTAKAVVPPSQMRRTDPG 79
AGG TA P SQMRR G
Sbjct: 20 AGGGGATASFPAPKSQMRRRRSG 42
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 25.0 bits (52), Expect = 8.5
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 19 SPYQCGTRPGVKRPEIPTKNPRVRPPHLGWGHHGFRSHRVAPCGEPTGPRP 171
SP +RP V P P + PP HH R HR + +P P+P
Sbjct: 14 SPPPFSSRPRVVGPPPPPPSDPPPPPPPHHHHHHRRRHRHSKKPKPQ-PQP 63
>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
Length = 430
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +1
Query: 103 GWGHHGFRSHRVAPCGEPTGPRPCNGP 183
G GHH H P P P P + P
Sbjct: 24 GHGHHQVHGHHHQPSSPPPPPPPESSP 50
>02_05_0849 +
32202610-32202880,32204234-32205711,32205993-32206143,
32206378-32206559
Length = 693
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +1
Query: 112 HHGFRSHRVAP--CGEPTGPRPCNGPMG 189
HHGF + R AP E P P G G
Sbjct: 19 HHGFETERAAPWAAAESKPPPPPRGRFG 46
>01_07_0295 - 42577779-42578330
Length = 183
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 58 PEIPTKNPRVRPPHLGWGHH 117
PE P P PP LG G H
Sbjct: 158 PETPFYTPPASPPRLGGGGH 177
>01_05_0383 + 21667798-21668079
Length = 93
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 106 WGHHGFRSHRVAPCGEPTGPRPCNG 180
WGH G + VAP P P P G
Sbjct: 32 WGHSGEKEAEVAPAARPK-PYPDGG 55
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,664,688
Number of Sequences: 37544
Number of extensions: 213849
Number of successful extensions: 875
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 14,793,348
effective HSP length: 44
effective length of database: 13,141,412
effective search space used: 262828240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -