Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D10
         (186 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   1.0  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    19   4.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               19   5.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    19   5.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    19   5.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    19   5.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           19   5.4  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    19   7.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    18   9.5  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 102 PSGSEQSRLEGVRSVGRHYY 43
           P+GS  SR   VR+V   YY
Sbjct: 86  PAGSVHSRDVNVRAVVAQYY 105



 Score = 21.4 bits (43), Expect = 1.0
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +3

Query: 30   GSGQDNNGDQQTGHPRAGSAQNRTVGQEDRRSH 128
            G+G         GHP   SA +R+  Q   R +
Sbjct: 1752 GNGHSGTMGPPVGHPTNASAHSRSGSQSMPRQN 1784


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 4   GCMNSARGLGQVKIIMATNRPDTLE 78
           GC N  R L +  I +     DTL+
Sbjct: 325 GCWNENRPLKRRNIEIVAKNNDTLQ 349


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 67  DTLEPALLRTGRLDRKIEDPTSQQTS*SWK 156
           DTLE  L    RL  +    T Q+T+ ++K
Sbjct: 370 DTLENVLAIVDRLMDETNQLTLQETADAFK 399


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 76  EPALLRTGRLDRKIEDP 126
           E  LL T  LDR +E P
Sbjct: 128 EDCLLFTIELDRVLESP 144


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 76  EPALLRTGRLDRKIEDP 126
           E  LL T  LDR +E P
Sbjct: 143 EDCLLFTIELDRVLESP 159


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 56  PTDRTPSSRL 85
           P DRTPS  L
Sbjct: 113 PADRTPSQSL 122


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 56  PTDRTPSSRL 85
           P DRTPS  L
Sbjct: 113 PADRTPSQSL 122


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 27  ASCRIHAAP 1
           ++CRIH +P
Sbjct: 440 SACRIHGSP 448


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
          protein.
          Length = 588

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 27 LGSGQDNNG 53
          LG+GQ+N G
Sbjct: 15 LGAGQNNKG 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,637
Number of Sequences: 438
Number of extensions: 856
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 41
effective length of database: 128,385
effective search space used:  2567700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)