Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D09
         (182 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86FC8 Cluster: Clone ZZD254 mRNA sequence; n=2; Schist...    34   0.71 
UniRef50_Q245M1 Cluster: Putative uncharacterized protein; n=1; ...    32   2.2  
UniRef50_A3YH88 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_A5I834 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_Q08958 Cluster: Putative uncharacterized protein YPL205...    31   5.0  
UniRef50_Q23H73 Cluster: Pectinacetylesterase family protein; n=...    30   8.7  

>UniRef50_Q86FC8 Cluster: Clone ZZD254 mRNA sequence; n=2;
           Schistosoma japonicum|Rep: Clone ZZD254 mRNA sequence -
           Schistosoma japonicum (Blood fluke)
          Length = 333

 Score = 33.9 bits (74), Expect = 0.71
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 69  NYTLSNAPPYFSLFHNHPKKNSCSLIMLW-CIC 164
           NY  +  PPY    +NH K   CSLI  W CIC
Sbjct: 300 NYPFNMYPPYLFGGNNHIKYACCSLIACWVCIC 332


>UniRef50_Q245M1 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1575

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 141  RNNCFFLDDCEIMKSMVEHLRVCSYGVYII 52
            R N  F DD E MK+  E L  C++ VYII
Sbjct: 1074 RRNNIFADDLEEMKNSYEQLMNCNFHVYII 1103


>UniRef50_A3YH88 Cluster: Putative uncharacterized protein; n=1;
           Marinomonas sp. MED121|Rep: Putative uncharacterized
           protein - Marinomonas sp. MED121
          Length = 329

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +3

Query: 9   KRLTYLFHYMIKNTKLYKHHNYTLSNAPPYFSLFHNHPKKNS 134
           ++L+Y +H  IK+++L   H+Y    + P+F +F   P  NS
Sbjct: 277 EQLSYAWHVAIKHSRL---HHYKWDKSRPHFEIFQAGPHNNS 315


>UniRef50_A5I834 Cluster: Putative uncharacterized protein; n=1;
           Clostridium botulinum A str. ATCC 3502|Rep: Putative
           uncharacterized protein - Clostridium botulinum A str.
           ATCC 3502
          Length = 63

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 33  YMIKNTKLYKHHNYTLSNAPPYFSLFHNHPKKNSCSLIMLWC 158
           Y  +     +HH     N  PY+ ++ N  K+N+C    L+C
Sbjct: 6   YFSEKVFFMQHHVKKNGNTLPYYGVYVNSEKRNNCPNYSLYC 47


>UniRef50_Q08958 Cluster: Putative uncharacterized protein YPL205C;
           n=1; Saccharomyces cerevisiae|Rep: Putative
           uncharacterized protein YPL205C - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 114

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +3

Query: 48  TKLYKHHNYTLSNAPPYFSLFHNH-PKKNSCSLIMLWCICPKC 173
           TK+  HH    S+  P+FSL+ NH P   SC         P+C
Sbjct: 46  TKMCFHHQMLSSSVEPFFSLYFNHVPYMWSCFNFFSSSPFPRC 88


>UniRef50_Q23H73 Cluster: Pectinacetylesterase family protein; n=3;
           Tetrahymena thermophila SB210|Rep: Pectinacetylesterase
           family protein - Tetrahymena thermophila SB210
          Length = 382

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 9   KRLTYLFHYMIKNTKLYKHHNYTLSNA 89
           + L ++F+YMIKN +L  +HN  LS +
Sbjct: 144 RMLVFIFNYMIKNYQLNLNHNVILSGS 170


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,833,831
Number of Sequences: 1657284
Number of extensions: 2894680
Number of successful extensions: 7954
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7950
length of database: 575,637,011
effective HSP length: 40
effective length of database: 509,345,651
effective search space used: 10186913020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)