Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D09
         (182 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021472-6|CAK55193.1|  290|Caenorhabditis elegans Hypothetical ...    27   2.3  
Z46793-2|CAA86771.1|  322|Caenorhabditis elegans Hypothetical pr...    26   4.1  
AL034393-5|CAA22311.1|  362|Caenorhabditis elegans Hypothetical ...    26   4.1  
AF159950-1|AAD45354.1|  362|Caenorhabditis elegans GSK-3 protein.      26   4.1  
AC006605-2|AAL00853.1|  139|Caenorhabditis elegans Hypothetical ...    26   4.1  
Z50741-4|CAO82050.1|  190|Caenorhabditis elegans Hypothetical pr...    25   5.4  
U88308-11|AAB42321.1|  154|Caenorhabditis elegans Hypothetical p...    25   5.4  
AC025715-6|AAK68450.1|   81|Caenorhabditis elegans Hypothetical ...    25   5.4  
AF099913-7|AAC68747.1|  226|Caenorhabditis elegans Hypothetical ...    25   7.1  
Z74031-18|CAA98453.3|  333|Caenorhabditis elegans Hypothetical p...    25   9.4  
Z74026-4|CAA98416.5|  774|Caenorhabditis elegans Hypothetical pr...    25   9.4  
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of...    25   9.4  
AC006679-8|AAK84470.1|  630|Caenorhabditis elegans Hypothetical ...    25   9.4  

>AL021472-6|CAK55193.1|  290|Caenorhabditis elegans Hypothetical
           protein Y17D7B.8 protein.
          Length = 290

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 141 RNNCFFLDDCEIMKSMVEHLRVCSY 67
           +N CF  +DC +M  M+E  R  SY
Sbjct: 53  KNGCFEKEDCIMMYFMLEKCRFYSY 77


>Z46793-2|CAA86771.1|  322|Caenorhabditis elegans Hypothetical
           protein C56G7.3 protein.
          Length = 322

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 36  MIKNTKLYKHHNYTLSNAPPYFSLFHNHPKKNSCSLIML 152
           M +   +YK    TL+N    FS      +K+  SLIML
Sbjct: 271 MCRFCSIYKSQKCTLANTQTIFSEITRQLEKSPLSLIML 309


>AL034393-5|CAA22311.1|  362|Caenorhabditis elegans Hypothetical
           protein Y18D10A.5 protein.
          Length = 362

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 101 FIISQSSKKKQLFLNYALVYLPQ 169
           F  S   KK +L+LN  L Y+P+
Sbjct: 95  FFYSSGEKKDELYLNLILEYVPE 117


>AF159950-1|AAD45354.1|  362|Caenorhabditis elegans GSK-3 protein.
          Length = 362

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 101 FIISQSSKKKQLFLNYALVYLPQ 169
           F  S   KK +L+LN  L Y+P+
Sbjct: 95  FFYSSGEKKDELYLNLILEYVPE 117


>AC006605-2|AAL00853.1|  139|Caenorhabditis elegans Hypothetical
          protein C07H6.9 protein.
          Length = 139

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 63 VYIILYF*SYNEINKLNV 10
          + I++YF SYN + +LNV
Sbjct: 46 ILIVIYFISYNGVQRLNV 63


>Z50741-4|CAO82050.1|  190|Caenorhabditis elegans Hypothetical
           protein F55G7.4 protein.
          Length = 190

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = +3

Query: 42  KNTKLYKHHNYTLSNAPPYFSLFHNHPKKNSCSLIMLWCI 161
           KN + YK    T  N P       N   KNS +L  +W I
Sbjct: 150 KNLEKYKPDINTERNNPTSGESLSNRKSKNSKTLFTIWVI 189


>U88308-11|AAB42321.1|  154|Caenorhabditis elegans Hypothetical
           protein C32E8.1 protein.
          Length = 154

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 51  KLYKHHNYTLSNAPPYFSLFH 113
           K+YK +N T+ N P  FSL +
Sbjct: 133 KVYKFNNKTIENLPKNFSLIN 153


>AC025715-6|AAK68450.1|   81|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.9 protein.
          Length = 81

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = -3

Query: 180 MLHIWGKYTRA 148
           +LHIWGK+TR+
Sbjct: 69  VLHIWGKFTRS 79


>AF099913-7|AAC68747.1|  226|Caenorhabditis elegans Hypothetical
           protein C29F9.5 protein.
          Length = 226

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 123 LDDCEIMKSMVEHLRVCSYG 64
           + DC IMK +++H+  C  G
Sbjct: 42  IQDCVIMKEVLKHMTSCKEG 61


>Z74031-18|CAA98453.3|  333|Caenorhabditis elegans Hypothetical
           protein F32D8.1 protein.
          Length = 333

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 144 LRNNCFFLDDCEIMKSMVEHLRVCS 70
           +R  CFF+D+   M S+++H  + S
Sbjct: 107 MRGKCFFVDNEVEMLSLIQHDHIIS 131


>Z74026-4|CAA98416.5|  774|Caenorhabditis elegans Hypothetical
           protein B0240.2 protein.
          Length = 774

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 19  LIYFII*LKIQNYINTITTHSQMLHHTFHYFTIIQKK 129
           ++YF++  K   Y   I T    + H F  FT+I  K
Sbjct: 93  VMYFLLSFKYSQYPEFIGTSISTIIHVFLIFTLIFPK 129


>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
           constitutive dauerformation protein 2 protein.
          Length = 1446

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 97  YGGAFESV*LWCLYNFVFLI 38
           Y    E + +W LYN  FLI
Sbjct: 917 YNDTCEEIQIWTLYNITFLI 936


>AC006679-8|AAK84470.1|  630|Caenorhabditis elegans Hypothetical
           protein R13A5.9 protein.
          Length = 630

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 57  YKHHNYTLSNAPPYFSLFHNHPKKNSCSLIMLWCICPKCE 176
           Y   NY +  +PP+ +  +  P      +++L  IC  CE
Sbjct: 197 YNEDNYGILVSPPHSTRVYRQPAVEQAFMLLLILIC-LCE 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,573,976
Number of Sequences: 27780
Number of extensions: 79454
Number of successful extensions: 191
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 12,740,198
effective HSP length: 41
effective length of database: 11,601,218
effective search space used: 220423142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)