Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_D08
(302 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0196 - 5678744-5679222,5679304-5679937 28 1.2
11_04_0299 + 16127671-16128180,16128217-16128516 28 1.6
10_01_0013 + 154098-154101,154513-154673,154773-154847,155071-15... 27 2.1
02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856 27 2.1
12_02_0541 + 20162313-20162374,20162670-20163419,20164627-201648... 27 2.8
11_03_0191 - 11366831-11367676 27 2.8
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 27 2.8
01_05_0322 + 20932151-20932470,20933076-20933146,20933259-20933266 27 2.8
01_05_0169 + 18874799-18875057,18875103-18875338 27 2.8
11_06_0387 + 23038490-23038662,23039246-23039303,23039471-230395... 27 3.7
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 27 3.7
11_04_0300 - 16130589-16131158,16131594-16131680 26 4.9
05_03_0682 - 16916437-16916686,16916761-16916822,16917082-169171... 26 4.9
05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883,615... 26 4.9
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403... 26 4.9
09_02_0472 + 9657354-9658346 26 6.5
12_02_0292 + 16979550-16980662,16983249-16983731 25 8.6
12_02_0213 - 15745459-15745908,15745981-15746559 25 8.6
12_02_0062 - 13084207-13084800 25 8.6
11_04_0220 + 14991666-14992892 25 8.6
09_02_0125 + 4554786-4556012 25 8.6
07_03_0614 - 19974200-19975426 25 8.6
07_03_0416 - 17962740-17963009,17963076-17963732 25 8.6
07_03_0201 - 15036103-15037329 25 8.6
07_02_0011 + 11753791-11753923,11754178-11754269,11757396-117576... 25 8.6
07_01_0390 + 2931331-2932299 25 8.6
04_04_0874 - 28988687-28989736 25 8.6
04_04_0530 + 26024931-26025923 25 8.6
04_01_0472 - 6144655-6145182,6145204-6145881,6149337-6149765,614... 25 8.6
04_01_0230 - 2921845-2922690 25 8.6
03_05_0480 + 24740567-24741559 25 8.6
02_04_0176 + 20658610-20659836 25 8.6
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 25 8.6
01_03_0141 + 13015330-13016175 25 8.6
01_02_0066 + 10785843-10786835 25 8.6
>09_02_0196 - 5678744-5679222,5679304-5679937
Length = 370
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSEV 91
RD FF T+ Y FHA+L EV
Sbjct: 214 RDRYFFLTRPYPPAFHALLGEV 235
>11_04_0299 + 16127671-16128180,16128217-16128516
Length = 269
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSEV 91
RD FF T Y FHA+L EV
Sbjct: 125 RDRYFFLTPSYPPAFHALLGEV 146
>10_01_0013 +
154098-154101,154513-154673,154773-154847,155071-155571,
155873-156214,158107-158234,158296-158342,160117-160196,
160569-160654,161409-161556,161947-162082,162160-162488,
162953-163169,164547-164572
Length = 759
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 18 SSIEMQFFFLQNVMYVHFMQFFLKCFCIEGHNLLILTSYNT-YCD 149
SSI +F F + ++ + FCI+ HN L Y T YCD
Sbjct: 372 SSILKEFGFCPKEKCIDNIKLYCS-FCIQNHNFLSPYMYGTSYCD 415
>02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856
Length = 299
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y TFHA+L E
Sbjct: 62 RDRYFFLTPPYPPTFHALLGE 82
>12_02_0541 +
20162313-20162374,20162670-20163419,20164627-20164820,
20165001-20165074,20165094-20165114
Length = 366
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSEV 91
RD FF T Y FHA+L EV
Sbjct: 135 RDRYFFLTPPYPPAFHALLGEV 156
>11_03_0191 - 11366831-11367676
Length = 281
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSEV 91
RD FF T Y FHA+L EV
Sbjct: 125 RDRYFFLTPPYPPAFHALLGEV 146
>01_05_0660 - 24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 27.1 bits (57), Expect = 2.8
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 60 YVHFMQFFLKCFCIEGHNLLILTSYNTYCDSP*DVSDY-LWLLMFNFVAKHRRVPVVWIH 236
Y+ FM F L F G + LT N + S + Y +W L FV RVP+ W
Sbjct: 1322 YLFFMVFTLLYFTFYGMMAVGLTP-NYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRW 1380
Query: 237 SC 242
C
Sbjct: 1381 YC 1382
>01_05_0322 +
20932151-20932470,20933076-20933146,20933259-20933266
Length = 132
Score = 27.1 bits (57), Expect = 2.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 79 NCMKCTYITFCKKKNC 32
+C C Y+ FCK++ C
Sbjct: 10 SCRSCQYVNFCKREAC 25
>01_05_0169 + 18874799-18875057,18875103-18875338
Length = 164
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSEV 91
RD FF T Y FHA+L EV
Sbjct: 65 RDRYFFLTPPYPPAFHALLGEV 86
>11_06_0387 +
23038490-23038662,23039246-23039303,23039471-23039551,
23039640-23039675,23039821-23040060,23040155-23040293,
23041417-23041889
Length = 399
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 281 NSHGNLLLQN*HRAAMNPNNRHTAMFSDEIEH 186
+ H ++L + H+A N NNR D I+H
Sbjct: 281 SEHSDMLASDVHKAGTNSNNRLRRAPDDPIDH 312
>09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 26.6 bits (56), Expect = 3.7
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 60 YVHFMQFFLKCFCIEGHNLLILT-SYNTYCDSP*DVSDY-LWLLMFNFVAKHRRVPVVW 230
Y+ FM F L + G + LT SYN S + Y +W L F+ R+P+ W
Sbjct: 1206 YLFFMYFTLSYYTFYGMMSVGLTPSYNVA--SVVSTAFYAIWNLFSGFIIPRTRIPIWW 1262
>11_04_0300 - 16130589-16131158,16131594-16131680
Length = 218
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
R+ FFFT Y FHA+L E
Sbjct: 62 RERYFFFTPPYPPAFHALLGE 82
>05_03_0682 -
16916437-16916686,16916761-16916822,16917082-16917147,
16917606-16917737,16917925-16918026,16918146-16918343,
16918409-16918555,16918804-16918914,16919661-16920194,
16920269-16920425,16920511-16920660,16920744-16920883,
16921668-16921784,16922759-16922932,16923020-16923187,
16923323-16923464,16923610-16923728,16924997-16925098,
16925618-16925701,16926843-16927142
Length = 1084
Score = 26.2 bits (55), Expect = 4.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 106 PSIQKHFRKNCMKCTYITFCK 44
P IQK ++NC C + CK
Sbjct: 280 PKIQKDHKENCCSCGLFSCCK 300
>05_02_0053 -
6152204-6152329,6152817-6152981,6154698-6154883,
6155055-6155078,6155649-6155822
Length = 224
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 51 NVMYVHFMQFFLKCFCIEGHNLLILTSYNTYCDS 152
N++ +H Q FL G L+I+ Y T+C S
Sbjct: 88 NMIDIHSTQEFLDALRDAGDRLVIVEFYGTWCGS 121
>01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,
4034616-4034839,4035168-4035332,4035591-4035881,
4035971-4036303,4036391-4036485,4036570-4036689,
4036778-4036934,4037176-4037279,4037383-4037543,
4037636-4037952,4038655-4038936,4039020-4039321,
4039453-4039543,4040227-4040280,4040367-4040684,
4041008-4041092,4041178-4041266,4041474-4041594,
4042136-4042431
Length = 1434
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +3
Query: 60 YVHFMQFFLKCFCIEGHNLLILTSYNTYCDSP*DVSDYLWLLMFNFVAKHRRVPVVW 230
Y+ FM F L F G +T +T LW L F+ +R+P W
Sbjct: 1294 YLFFMYFTLLYFTFYGMMTTAITPNHTVAPIIAAPFYTLWNLFCGFMIPRKRIPAWW 1350
>09_02_0472 + 9657354-9658346
Length = 330
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 174 RDRYFFLTSPYPPAFHALLGE 194
>12_02_0292 + 16979550-16980662,16983249-16983731
Length = 531
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>12_02_0213 - 15745459-15745908,15745981-15746559
Length = 342
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 228 RDRYFFLTPPYPPAFHALLGE 248
>12_02_0062 - 13084207-13084800
Length = 197
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 41 RDRYFFLTPPYPPAFHALLGE 61
>11_04_0220 + 14991666-14992892
Length = 408
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>09_02_0125 + 4554786-4556012
Length = 408
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>07_03_0614 - 19974200-19975426
Length = 408
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>07_03_0416 - 17962740-17963009,17963076-17963732
Length = 308
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 174 RDRYFFLTPPYPPAFHALLGE 194
>07_03_0201 - 15036103-15037329
Length = 408
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>07_02_0011 +
11753791-11753923,11754178-11754269,11757396-11757689,
11757801-11758622
Length = 446
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 290 RDRYFFLTPPYPPAFHALLGE 310
>07_01_0390 + 2931331-2932299
Length = 322
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 174 RDRYFFLTPPYPPAFHALLGE 194
>04_04_0874 - 28988687-28989736
Length = 349
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>04_04_0530 + 26024931-26025923
Length = 330
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 174 RDRYFFLTPPYPPAFHALLGE 194
>04_01_0472 -
6144655-6145182,6145204-6145881,6149337-6149765,
6149930-6150123,6150222-6150261
Length = 622
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 466 RDRYFFLTPPYPPAFHALLGE 486
>04_01_0230 - 2921845-2922690
Length = 281
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 125 RDRYFFLTPPYPPAFHALLGE 145
>03_05_0480 + 24740567-24741559
Length = 330
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 174 RDCYFFLTLPYPPAFHALLGE 194
>02_04_0176 + 20658610-20659836
Length = 408
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 252 RDRYFFLTPPYPPAFHALLGE 272
>01_03_0280 -
14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 799 RDRYFFLTPPYPPAFHALLGE 819
>01_03_0141 + 13015330-13016175
Length = 281
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 125 RDRYFFLTPPYPPAFHALLGE 145
>01_02_0066 + 10785843-10786835
Length = 330
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 26 RDAIFFFTKCYVCTFHAILSE 88
RD FF T Y FHA+L E
Sbjct: 174 RDRYFFLTPPYPPAFHALLGE 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,408,052
Number of Sequences: 37544
Number of extensions: 120583
Number of successful extensions: 266
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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