Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D08
         (302 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    29   0.051
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    23   1.9  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   3.4  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 28.7 bits (61), Expect = 0.051
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 127  VNINKLCPSIQKHFRKNCMKCTYITFCKKKNCIS 26
            V +  L  S+ KHF     KCT  T C KKNC S
Sbjct: 917  VGLQFLHESLFKHFINITSKCTASTTC-KKNCAS 949


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -3

Query: 162 HLTVSHSKYYRMLILINYALRYRNTSERIA*NVHT*HFVKKKIAS 28
           H   SH++YY M    NY+     T+  I+  ++  H   + IA+
Sbjct: 133 HSHYSHNQYYYMQNYSNYSQHNFQTAGPISSGLYNGHHPHQTIAT 177


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = +1

Query: 37  FFFYKMLCMYISCNSF*SVSVSK--GIIY 117
           F F +  C+Y+S N    VS+ +   +IY
Sbjct: 153 FLFMRAFCLYLSSNVLVCVSLDRCFAVIY 181


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 320,521
Number of Sequences: 2352
Number of extensions: 5527
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19557855
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)