Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D07
         (225 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   0.94 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   1.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   1.6  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      19   5.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    19   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   5.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    19   5.0  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    19   5.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   6.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   6.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   6.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    19   6.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    19   8.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    19   8.7  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 0.94
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 154 VSDIPSPYTDIDCSDFPEYI 213
           V  +PSP +D +C D  ++I
Sbjct: 168 VKKLPSPASDSECFDRRKFI 187


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 1.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 103 NKLKLMTFVMNITLL*LVSDIPSPY 177
           NK+     +  +TLL ++S I  PY
Sbjct: 23  NKIYSFLLLTTLTLLVILSSIDRPY 47


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 1.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 97  QHNKLKLMTFVMN 135
           + NK++L+TF MN
Sbjct: 253 EQNKIRLITFEMN 265


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 172 DWVYHLPITVMLCSLRKSS 116
           DWVY+     + CS++  S
Sbjct: 83  DWVYYESRAHIHCSVKSES 101


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 123 SHQFQFVVLIWL 88
           SHQ  ++ L+WL
Sbjct: 214 SHQHAWIWLVWL 225


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 123 SHQFQFVVLIWL 88
           SHQ  ++ L+WL
Sbjct: 447 SHQHAWIWLVWL 458


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 123 SHQFQFVVLIWL 88
           SHQ  ++ L+WL
Sbjct: 447 SHQHAWIWLVWL 458


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 179 VYGLGISLTNYSNVMFITKVI 117
           ++GLG+ L    + + IT+VI
Sbjct: 239 IFGLGLLLMFAVSFLIITQVI 259


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 32  GNKLRCIQILQAHIVKSLFNQI 97
           G KLR   ILQ HI    +N +
Sbjct: 78  GYKLRKGTILQLHIYDLHYNPV 99


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 6.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 123 SHQFQFVVLIWL 88
           SHQ  ++ L+WL
Sbjct: 460 SHQHAWIWLLWL 471


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 6.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 123 SHQFQFVVLIWL 88
           SHQ  ++ L+WL
Sbjct: 460 SHQHAWIWLLWL 471


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 6.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 123 SHQFQFVVLIWL 88
           SHQ  ++ L+WL
Sbjct: 460 SHQHAWIWLLWL 471


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 6.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 123 SHQFQFVVLIWL 88
           SHQ  ++ L+WL
Sbjct: 460 SHQHAWIWLLWL 471


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.0 bits (37), Expect = 6.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 45  DVFKSYKHI*SKVYSTKSAQQTEIDDFRN 131
           D+F +  H+     S  S  + + D FRN
Sbjct: 266 DLFGNMPHLQVLDLSHNSLYELDFDTFRN 294


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 18.6 bits (36), Expect = 8.7
 Identities = 5/19 (26%), Positives = 10/19 (52%)
 Frame = -3

Query: 169 WVYHLPITVMLCSLRKSSI 113
           W++HL    + C L +  +
Sbjct: 365 WIHHLARHAVACFLTRGDL 383


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 18.6 bits (36), Expect = 8.7
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 188 SISVYGLGISLTNYSNV 138
           SISVY   +  T Y  +
Sbjct: 140 SISVYSSSVGYTQYVRI 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,580
Number of Sequences: 336
Number of extensions: 1038
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  3116485
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)