Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_D07
(225 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 0.086
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 0.80
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 0.80
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 1.4
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 1.9
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 21 1.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 3.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 20 4.3
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 19 5.7
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 19 5.7
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 19 7.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 19 9.9
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 19 9.9
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.4 bits (53), Expect = 0.086
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 189 VNICIWTGYITYQ 151
+NIC W Y+TYQ
Sbjct: 483 LNICYWVIYVTYQ 495
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.2 bits (45), Expect = 0.80
Identities = 11/46 (23%), Positives = 17/46 (36%)
Frame = -1
Query: 195 TAVNICIWTGYITYQLQ*CYVHYESHQFQFVVLIWLNKLLTICACK 58
T ++ W GY + C S F+F ++ C CK
Sbjct: 42 TVFSVLFWLGYCNSAINPCIYALFSKDFRFA----FKSIICKCFCK 83
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 0.80
Identities = 11/46 (23%), Positives = 17/46 (36%)
Frame = -1
Query: 195 TAVNICIWTGYITYQLQ*CYVHYESHQFQFVVLIWLNKLLTICACK 58
T ++ W GY + C S F+F ++ C CK
Sbjct: 490 TVFSVLFWLGYCNSAINPCIYALFSKDFRFA----FKSIICKCFCK 531
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 1.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 52 SNLTSTYSQKFIQPNQHNKLKL 117
S L++ Y Q F QP Q K+
Sbjct: 14 SLLSNAYKQGFCQPTQRTMSKI 35
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.0 bits (42), Expect = 1.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 126 ESHQFQFVVLIWLNKLLTIC 67
++ F+ VV IW+ L IC
Sbjct: 73 KAENFKDVVKIWVGPKLVIC 92
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.0 bits (42), Expect = 1.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 46 MYSNLTSTYSQKFIQPNQHNK 108
+YS+L S + K I QH+K
Sbjct: 41 VYSSLNSLRNHKSIYHRQHSK 61
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.2 bits (40), Expect = 3.2
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 223 DNFLCIQESHC 191
+ FLC E+HC
Sbjct: 733 EQFLCRYEAHC 743
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 19.8 bits (39), Expect = 4.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 88 E*TFDYMC 65
E TFDYMC
Sbjct: 616 EITFDYMC 623
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.4 bits (38), Expect = 5.7
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 154 PITVMLCSLRKSSISVCCADLV 89
P+ +CSLR +S DLV
Sbjct: 168 PLDRQVCSLRMASYGWTTDDLV 189
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.4 bits (38), Expect = 5.7
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 154 PITVMLCSLRKSSISVCCADLV 89
P+ +CSLR +S DLV
Sbjct: 168 PLDRQVCSLRMASYGWTTDDLV 189
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 19.0 bits (37), Expect = 7.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -1
Query: 156 YQLQ*CYVHYESHQFQFV 103
YQL CYV + Q V
Sbjct: 112 YQLVKCYVEFHPEVLQTV 129
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 18.6 bits (36), Expect = 9.9
Identities = 5/19 (26%), Positives = 10/19 (52%)
Frame = -3
Query: 169 WVYHLPITVMLCSLRKSSI 113
W++HL + C L + +
Sbjct: 369 WIHHLARHAVACFLTRGDL 387
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 18.6 bits (36), Expect = 9.9
Identities = 5/13 (38%), Positives = 8/13 (61%)
Frame = -2
Query: 41 ICCRIRCLNRLFW 3
+ C I C++ L W
Sbjct: 291 LICHILCMSDLHW 303
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,040
Number of Sequences: 438
Number of extensions: 1219
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3533460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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