Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D06
         (196 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   0.16 
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    22   0.49 
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    22   0.49 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   1.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   1.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   2.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   2.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    20   2.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    19   4.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    19   4.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   4.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     19   6.0  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    19   6.0  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    18   8.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    18   8.0  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 0.16
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 158 QRIAPVSLHLHSPPMVHPCKLPPC 87
           +R+ P  +HL     +H C +P C
Sbjct: 300 ERLGPAGVHLRKKN-IHSCHIPGC 322


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 0.49
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 82  YQTQYTHFLK 53
           YQTQY H+L+
Sbjct: 111 YQTQYAHYLE 120


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 0.49
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 82  YQTQYTHFLK 53
           YQTQY H+L+
Sbjct: 111 YQTQYAHYLE 120


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 161 HQRIAPVSLHLHSPPMVHPCKLPPC 87
           H  + P ++H+   P + P   P C
Sbjct: 368 HHDMLPETMHMGMGPSLTPLASPGC 392



 Score = 18.6 bits (36), Expect = 6.0
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 137 LHLHSPPMVHPCKLPPCI 84
           LH H  P +H    PP +
Sbjct: 89  LHSHHGPPIHHQIRPPIL 106


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 161 HQRIAPVSLHLHSPPMVHPCKLPPC 87
           H  + P ++H+   P + P   P C
Sbjct: 368 HHDMLPETMHMGMGPSLTPLASPGC 392



 Score = 18.6 bits (36), Expect = 6.0
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 137 LHLHSPPMVHPCKLPPCI 84
           LH H  P +H    PP +
Sbjct: 89  LHSHHGPPIHHQIRPPIL 106


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 69  YCVWYYAWW*LAGVH 113
           YC +YYA++   GVH
Sbjct: 113 YCYYYYAFF---GVH 124


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 82  YQTQYTHFLKIY 47
           Y T+Y H LKI+
Sbjct: 294 YATKYCHSLKIH 305


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
          protein.
          Length = 69

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 82 YQTQYTHFLKIY 47
          Y T+Y H LKI+
Sbjct: 52 YATKYCHSLKIH 63


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 57  SKFTLKLSGLY 25
           + FT+K+SGL+
Sbjct: 268 ANFTVKISGLF 278


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 57  SKFTLKLSGLY 25
           + FT+K+SGL+
Sbjct: 224 ANFTVKISGLF 234


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = -3

Query: 113 VHPCKLPPCIIPNTIHAFSQNLL*SYPDCTL 21
           V  CK  PC    T H    +   S P  TL
Sbjct: 223 VDDCKPNPCQNGGTCHDLVNSFSCSCPSGTL 253


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 137 LHLHSPPMVHPCKLPPCI 84
           LH H  P +H    PP +
Sbjct: 89  LHSHHGPPIHHQIRPPIL 106


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 137 LHLHSPPMVHPCKLPPCI 84
           LH H  P +H    PP +
Sbjct: 89  LHSHHGPPIHHQIRPPIL 106


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 4/7 (57%), Positives = 6/7 (85%)
 Frame = +3

Query: 66  VYCVWYY 86
           V C+WY+
Sbjct: 293 VMCIWYW 299


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 4/7 (57%), Positives = 6/7 (85%)
 Frame = +3

Query: 66  VYCVWYY 86
           V C+WY+
Sbjct: 293 VMCIWYW 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,794
Number of Sequences: 336
Number of extensions: 912
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2156020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)