Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D02
         (314 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6CCB2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    33   1.2  
UniRef50_A3Q3U8 Cluster: Putative uncharacterized protein; n=3; ...    32   2.2  
UniRef50_Q2U5M2 Cluster: Predicted protein; n=1; Aspergillus ory...    32   2.2  
UniRef50_Q2NG30 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  
UniRef50_Q8XKU6 Cluster: Ribonuclease R; n=11; Firmicutes|Rep: R...    30   8.7  
UniRef50_Q8IBU1 Cluster: Zinc transporter, putative; n=2; Plasmo...    30   8.7  

>UniRef50_Q6CCB2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 437

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 165 VYSFSAEMATTRWNIQCG*ATPKAEWRR 82
           VYS ++E + TRWN+      PK+EWRR
Sbjct: 203 VYSLNSEASITRWNLD----APKSEWRR 226


>UniRef50_A3Q3U8 Cluster: Putative uncharacterized protein; n=3;
           Mycobacterium|Rep: Putative uncharacterized protein -
           Mycobacterium sp. (strain JLS)
          Length = 324

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -2

Query: 154 QCGNGDHTLEYT---VRVGHS*GRMATRLCEGCGNPLDAVLELNFSVQFS 14
           +CG     L  T   V VGHS G   T + +  G+P DAV  L + VQ +
Sbjct: 115 RCGEIHDQLPVTLPLVGVGHSMGACLTMMVQAMGHPYDAVALLGYGVQIT 164


>UniRef50_Q2U5M2 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 147

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 192 FTYVSFSIFSCFALSCFALNIFSVIYYNYQKQLNISFG 305
           F++ SFS FSCF+ S F+ + FS++    +     S G
Sbjct: 48  FSFSSFSYFSCFSFSYFSFSSFSLLLIGIENFSRSSLG 85


>UniRef50_Q2NG30 Cluster: Putative uncharacterized protein; n=1;
           Methanosphaera stadtmanae DSM 3091|Rep: Putative
           uncharacterized protein - Methanosphaera stadtmanae
           (strain DSM 3091)
          Length = 266

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
 Frame = +3

Query: 165 LIADIIYI*---FTYVSFS---IFSCFALSCFALNIFSVIYYNYQKQLNISFGAHN 314
           ++ DI++I    FT+ S     I+    ++CF L +  ++ Y Y K+ NISF  H+
Sbjct: 22  VLLDIVFIVIGPFTHTSMELKFIYIFDKITCFLLILDLLVIYKYSKEENISFAKHH 77


>UniRef50_Q8XKU6 Cluster: Ribonuclease R; n=11; Firmicutes|Rep:
           Ribonuclease R - Clostridium perfringens
          Length = 751

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 22  EPKNSVQVLHPVDSHNLHITASPFCLRSGLPALYIPTCGRHF 147
           EP++  +V+  V   N  +  +   LRS + A Y P C  HF
Sbjct: 502 EPRDLQKVVEEVKGKNEEMVINTLLLRSMMQARYSPDCAGHF 543


>UniRef50_Q8IBU1 Cluster: Zinc transporter, putative; n=2;
           Plasmodium falciparum|Rep: Zinc transporter, putative -
           Plasmodium falciparum (isolate 3D7)
          Length = 556

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 222 CFALSCFALNIFSVIYYNYQKQLNISFGAH 311
           C  LS FALN+FS+   ++Q  +++SFG H
Sbjct: 72  CDLLS-FALNLFSIYVSSFQGNVDMSFGYH 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,777,955
Number of Sequences: 1657284
Number of extensions: 4302006
Number of successful extensions: 10192
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10190
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)