Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_D01
         (301 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal prot...   103   3e-23
AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p pro...   103   3e-23
AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA...   103   3e-23
AY113590-1|AAM29595.1|  705|Drosophila melanogaster RH41322p pro...    28   1.9  
AE013599-3538|AAF46952.3|  705|Drosophila melanogaster CG9882-PA...    28   1.9  
BT004841-1|AAO45197.1|  358|Drosophila melanogaster RH17413p pro...    27   4.4  
AE014298-1137|AAF46336.1|  358|Drosophila melanogaster CG10763-P...    27   4.4  

>X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal protein
           L18a protein.
          Length = 177

 Score =  103 bits (248), Expect = 3e-23
 Identities = 49/72 (68%), Positives = 55/72 (76%)
 Frame = +2

Query: 8   AVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRL 187
           AVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH SKI FPL +RVH     
Sbjct: 105 AVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNR 164

Query: 188 NTFAYKRPSTYF 223
             F++++P TYF
Sbjct: 165 KLFSFRKPRTYF 176


>AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p
           protein.
          Length = 177

 Score =  103 bits (248), Expect = 3e-23
 Identities = 49/72 (68%), Positives = 55/72 (76%)
 Frame = +2

Query: 8   AVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRL 187
           AVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH SKI FPL +RVH     
Sbjct: 105 AVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNR 164

Query: 188 NTFAYKRPSTYF 223
             F++++P TYF
Sbjct: 165 KLFSFRKPRTYF 176


>AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA
           protein.
          Length = 177

 Score =  103 bits (248), Expect = 3e-23
 Identities = 49/72 (68%), Positives = 55/72 (76%)
 Frame = +2

Query: 8   AVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRL 187
           AVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH SKI FPL +RVH     
Sbjct: 105 AVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNR 164

Query: 188 NTFAYKRPSTYF 223
             F++++P TYF
Sbjct: 165 KLFSFRKPRTYF 176


>AY113590-1|AAM29595.1|  705|Drosophila melanogaster RH41322p
           protein.
          Length = 705

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -1

Query: 271 CYEMAFIVIIPYIKLHKVRARPLVCKGIETLVLVNAFW*RETDLAG--VELLNLWSTTCR 98
           C    + + + ++ LHK+RA    C+G + L L +    R  + A   VE   LW   CR
Sbjct: 533 CSARIYALPVEFLDLHKIRAPVGSCEGFD-LRLFDEMVERSAEQAVSLVEAQPLWEYPCR 591

Query: 97  CL 92
            L
Sbjct: 592 AL 593


>AE013599-3538|AAF46952.3|  705|Drosophila melanogaster CG9882-PA
           protein.
          Length = 705

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -1

Query: 271 CYEMAFIVIIPYIKLHKVRARPLVCKGIETLVLVNAFW*RETDLAG--VELLNLWSTTCR 98
           C    + + + ++ LHK+RA    C+G + L L +    R  + A   VE   LW   CR
Sbjct: 533 CSARIYALPVEFLDLHKIRAPVGSCEGFD-LRLFDEMVERSAEQAVSLVEAQPLWEYPCR 591

Query: 97  CL 92
            L
Sbjct: 592 AL 593


>BT004841-1|AAO45197.1|  358|Drosophila melanogaster RH17413p
           protein.
          Length = 358

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 141 LLVWNCLTCGRRHAAALITSTLMIC 67
           L++W+  T  + HA  + T+ +M C
Sbjct: 94  LIIWDAFTTNKEHAVTMPTTWIMAC 118


>AE014298-1137|AAF46336.1|  358|Drosophila melanogaster CG10763-PA
           protein.
          Length = 358

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 141 LLVWNCLTCGRRHAAALITSTLMIC 67
           L++W+  T  + HA  + T+ +M C
Sbjct: 94  LIIWDAFTTNKEHAVTMPTTWIMAC 118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,812,238
Number of Sequences: 53049
Number of extensions: 260711
Number of successful extensions: 598
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)