Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C22
(317 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 77 5e-16
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 52 2e-08
SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr 2... 31 0.032
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.17
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 25 3.7
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 25 3.7
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 25 3.7
SPCC965.08c |alr1||alanine racemase Alr1|Schizosaccharomyces pom... 25 3.7
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 3.7
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 3.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 24 4.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 24 6.4
SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 24 6.4
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 23 8.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 8.5
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 23 8.5
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 23 8.5
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 23 8.5
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 77.4 bits (182), Expect = 5e-16
Identities = 42/97 (43%), Positives = 59/97 (60%)
Frame = +2
Query: 26 FNVVAVDSRGSKHRGRAWESAIRGKLGQIELDDQVEVLQWLAKETGCIDMERVAIHGWSY 205
F VV +D RG+ G A+ ++ LG+ E DQ + ++ A + +D V I GWSY
Sbjct: 590 FIVVTLDGRGTGFNGNAFRYSVSRHLGEWESYDQGQAGKFWA-DLPFVDENHVGIWGWSY 648
Query: 206 GGYLSLLALATRPNIFKVCVAGAPVTCWRLYDTAYTE 316
GGYL+L L T+ ++F +A APVT WRLYD+ YTE
Sbjct: 649 GGYLTLKTLETQ-DVFSYGMAVAPVTDWRLYDSVYTE 684
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 52.0 bits (119), Expect = 2e-08
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +2
Query: 155 ETGCIDMERVAIHGWSYGGYLSLLALATRPNIFKVCVAGAPVTCWRLYDTAYTE 316
+T ID RV I GWS+GGYL+L L + K APVT WR YD Y+E
Sbjct: 704 DTPYIDRHRVGIWGWSFGGYLTLKIL-ENADFIKTGAVVAPVTDWRYYDAYYSE 756
>SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 683
Score = 31.5 bits (68), Expect = 0.032
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +2
Query: 23 GFNVVAVDSRGSKHRGRAWESAIRGKLGQIELDDQVEVLQWLAKETGCIDMERVAIHGWS 202
GF V A+D GS G+ + +I G D ++++ D E++ G S
Sbjct: 476 GFIVFALDPTGSTGYGQRFTDSIALDWGGKPYKDIELGVEYIKNHLSYADSEKMVALGAS 535
Query: 203 YGGYL 217
YGGY+
Sbjct: 536 YGGYM 540
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.1 bits (62), Expect = 0.17
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -1
Query: 155 PSPATAAPQPDH-PARSGPVS-PEWQTPRPDRDAWNRGSPL 39
P PAT + P P SG V+ P QTP P A+ G+PL
Sbjct: 633 PRPATPSNPPRSLPPPSGQVNAPMSQTPNPISFAYQHGTPL 673
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 24.6 bits (51), Expect = 3.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 188 IHGWSYGGYLSLLALATRPNIFKVCVAGAPVTCWRLYDTA 307
I G G S+LA AT PN + +T WR D A
Sbjct: 2285 IAGQIIGTLTSMLARATAPNRLGPGLVFLDLTSWRFEDGA 2324
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 24.6 bits (51), Expect = 3.7
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Frame = -1
Query: 164 SRFPSPATAAPQPDHPARSGP------VSPEWQTPRPDRDAWNRGSPLRPR*NPLAASP 6
S FP+P+ A+P + + S P SP T +P GS NP +SP
Sbjct: 375 STFPNPSVASPAFPNSSTSNPSTAPASASPLASTLKPSTANDTNGSSSSSSSNPRTSSP 433
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 24.6 bits (51), Expect = 3.7
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Frame = -1
Query: 179 SPYRCSRFPSPATAAPQP------DHPARSGPVSPEWQTPRP 72
SP R PSP + P+P D+ A P+ P ++P P
Sbjct: 568 SPLRIRSRPSPLSLPPEPLLSPTIDYSATPFPLEPPPESPGP 609
>SPCC965.08c |alr1||alanine racemase Alr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 375
Score = 24.6 bits (51), Expect = 3.7
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 30 TWSQWTPAVPSIAVGPGSLPFGGNWARSSWMIRLRCCSGWRR 155
T QW S+A PG L GG+ W+ + C+ W R
Sbjct: 180 TLKQWDIFEKSVAHLPGPLSAGGSAIILGWLNTV--CTDWLR 219
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 24.6 bits (51), Expect = 3.7
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = -1
Query: 236 SPAPAATSNHHNSTRV*QPSPYRCSRFPSPATAAPQPDH-------PARSGPVSPEWQTP 78
S PAA S + + + P P +PA A+P P P SG P Q P
Sbjct: 892 SAQPAAMSRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQP 951
Query: 77 RPDRDAWNRGSPLRPR*NPLAASPR 3
N +P+ P+ +P+AA+ R
Sbjct: 952 SHP----NPYTPVAPQ-SPVAAASR 971
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 24.6 bits (51), Expect = 3.7
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -1
Query: 182 PSPYRCSRFPSPATAAPQPDHPARSGPVSPEWQTPRPDRDAWNRG-SPLRPR*NPLAAS 9
P P S P PA A+ + +S P Q P P +N SP P P+ AS
Sbjct: 284 PPPPHGSTTPLPAAASYTSMNMKQSSASHPVLQPPAPSTLQFNPSPSPAAPSYPPVDAS 342
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 24.2 bits (50), Expect = 4.8
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -1
Query: 182 PSPYRCSRFPSPATAAPQPDHPARSGPVSPEWQTPRPDRDAWNRGSPLRPR*NPLAASP 6
P+P P P+ AAP P+ + PV P+ P A G+P P+ P A+P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPV-PKPSVAAPPVPA-PSGAPPVPK--PSVAAP 1169
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 23.8 bits (49), Expect = 6.4
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = -1
Query: 245 SDESPAPAATSNHHNSTRV*QPSPYRCSRFPSPATAAPQPDHPARSGPVSPEWQTPRPDR 66
+ + P+ A + +ST PS + PSPA P P HP+ + S P R
Sbjct: 1502 AQQPPSSVAPATAPSSTL--PPSQSSFAHVPSPAP--PAPQHPSAAALSSAPADNSMPHR 1557
Query: 65 DA 60
+
Sbjct: 1558 SS 1559
Score = 23.4 bits (48), Expect = 8.5
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -1
Query: 182 PSPYRCSRFPSPATAAPQPDHPARSGPVSP 93
P P P+ +AP P PA S P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory
subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 545
Score = 23.8 bits (49), Expect = 6.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 92 EWQTPRPDRD 63
EWQ P PDRD
Sbjct: 298 EWQKPLPDRD 307
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 23.4 bits (48), Expect = 8.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 24 VSTWSQWTPAVPSIAVGPGSLPFGGNWARSS 116
+S WS+ A PSI P PF N + S
Sbjct: 416 LSPWSRSPVASPSIQTDPNRNPFFQNCLQES 446
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.4 bits (48), Expect = 8.5
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Frame = -1
Query: 242 DESPAPAATSNHHNSTRV*QPS--PYRCSRFPSPATAAPQPDHPARSGPVSPEWQTPRPD 69
D++ ++++S R P P + P A P P P + Q P P
Sbjct: 201 DQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPS 260
Query: 68 RDAWNRGS 45
R+ N GS
Sbjct: 261 RNVNNLGS 268
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 23.4 bits (48), Expect = 8.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 9/40 (22%)
Frame = +2
Query: 29 NVVAVDS---RGSKHRGRA------WESAIRGKLGQIELD 121
N +A+DS +G K R +A WE A+R IELD
Sbjct: 286 NALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELD 325
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 23.4 bits (48), Expect = 8.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 155 PSPATAAPQPDHP 117
PSPA + PQP +P
Sbjct: 424 PSPAESLPQPSNP 436
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 23.4 bits (48), Expect = 8.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 60 SIAVGPGSLPFGGNWARSSWMIRL--RCCSGWRRKPAASIWRGLLY 191
S+ V GS+ F NW+R I L CS + R +A W GL++
Sbjct: 410 SVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDR--SAVFW-GLVF 452
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,345,931
Number of Sequences: 5004
Number of extensions: 28076
Number of successful extensions: 108
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 85983492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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