Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C21
         (276 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   2.8  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   3.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   3.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   3.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    19   8.6  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              19   8.6  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    19   8.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   8.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   8.6  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -2

Query: 275 SPIRFSFSNSPTNLHLPKISFSGIS--IVFPVLND 177
           SP  F  S SPT+  L   +++GIS   VF  LND
Sbjct: 95  SPSSFFSSVSPTS--LGSENYTGISDLFVFDDLND 127


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 141 SYRSKC*KGRSNIV*NWKNYGNT 209
           SY   C  GR+  V  W  Y N+
Sbjct: 296 SYCKTCISGRAFQVLTWLGYSNS 318


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 6   RKTFCNLGYYIFIQYYSNY 62
           +KT+ N+ YY+    Y+ +
Sbjct: 189 KKTYNNIDYYLLAANYTGW 207


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 6   RKTFCNLGYYIFIQYYSNY 62
           +KT+ N+ YY+    Y+ +
Sbjct: 189 KKTYNNIDYYLLAANYTGW 207


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 132 CGGSYRSKC*KGR 170
           CGG+ RS+  +GR
Sbjct: 355 CGGNKRSQVFRGR 367


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 121 KLVFQNFVTSFLDENEVYRI 62
           ++V +     +LDENEV ++
Sbjct: 81  EVVVREIAEIYLDENEVNKL 100


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 110 KNQLLAKMWWILQV 151
           KNQ+L    W+ Q+
Sbjct: 48  KNQILTTNCWVTQI 61


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +1

Query: 7   GKHFVTW 27
           G HF+TW
Sbjct: 361 GPHFITW 367


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +1

Query: 7   GKHFVTW 27
           G HF+TW
Sbjct: 361 GPHFITW 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,899
Number of Sequences: 438
Number of extensions: 1540
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5388717
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)