Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C20
         (268 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   1.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   2.0  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   3.5  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   3.5  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   3.5  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   3.5  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    20   6.1  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    19   8.0  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    19   8.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    19   8.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   8.0  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 257 TSTLPACSPNVTGP 216
           T+TLPA S   TGP
Sbjct: 225 TTTLPAASATGTGP 238


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 2.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 75   EYHLHVCNLSTY 110
            E+HL + NL TY
Sbjct: 1039 EHHLQIMNLKTY 1050


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -3

Query: 248 LPACSPNVTGP 216
           LP C PNV  P
Sbjct: 46  LPFCGPNVINP 56


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -3

Query: 248 LPACSPNVTGP 216
           LP C PNV  P
Sbjct: 45  LPFCGPNVINP 55


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 254 STLPACSPNVTGPTCLKA*NISKC 183
           S +  C P      C K  N++KC
Sbjct: 109 SVMGKCLPTSGSDNCNKIYNLAKC 132


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 254 STLPACSPNVTGPTCLKA*NISKC 183
           S +  C P      C K  N++KC
Sbjct: 109 SVMGKCLPTSGSDNCNKIYNLAKC 132


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 205 FKHVGPVTL 231
           F+H+GP TL
Sbjct: 141 FRHIGPSTL 149


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = +1

Query: 205 FKHVGPVT 228
           F+H+GP+T
Sbjct: 145 FRHIGPLT 152


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = +1

Query: 205 FKHVGPVT 228
           F+H+GP+T
Sbjct: 386 FRHIGPLT 393


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 46  YVNEPQFLNLQYR 8
           YVN  QF+  QY+
Sbjct: 275 YVNTEQFVKSQYQ 287


>AF388659-1|AAK71995.1|  782|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform A
          protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 32 WFIYIKLCNYLVSNRISLTRL 94
          WF     C   +SNRIS  R+
Sbjct: 25 WFRISAGCVSRISNRISRNRV 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,275
Number of Sequences: 438
Number of extensions: 1342
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5012760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)