Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C19
(462 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003151-12|AAK18912.1| 149|Caenorhabditis elegans Ribosomal pr... 73 1e-13
Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 27 4.9
U23522-1|AAC46819.3| 962|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 27 6.5
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 27 6.5
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 27 6.5
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 27 6.5
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 27 6.5
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 27 6.5
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 27 6.5
Z93374-6|CAB07559.1| 108|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68749-4|CAA92959.2| 179|Caenorhabditis elegans Hypothetical pr... 27 8.6
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical ... 27 8.6
>AF003151-12|AAK18912.1| 149|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 10 protein.
Length = 149
Score = 72.5 bits (170), Expect = 1e-13
Identities = 46/108 (42%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Frame = +3
Query: 114 HPNIQIXXXXXXXXXXXXCNHLNLEDMFCEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIV 293
HPNI+ L ++ EQFAWRH+YWYLT+ GI YLR +L LP EIV
Sbjct: 32 HPNIE---GVSNLEVIKTLKSLASRELVKEQFAWRHYYWYLTDAGILYLREYLALPAEIV 88
Query: 294 PATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYR-----RAPPAGAP 422
PAT+K R V P A DR AYR A P GAP
Sbjct: 89 PATIKTKPREIRVPH-EDRAPRAAQGEKGDREAYRTEKVTEAGPGGAP 135
Score = 68.1 bits (159), Expect = 3e-12
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +2
Query: 29 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYV 196
M +PK + IYEYLF EGV VAKKD++A HP++E + NL+VIK ++SL SR V
Sbjct: 1 MFIPKSHTKLIYEYLFNEGVTVAKKDFNAKTHPNIEGVSNLEVIKTLKSLASRELV 56
>Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical
protein C14H10.3 protein.
Length = 830
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3
Query: 130 IWMFGCMVVFLSYHDSLLEEVLIDRNTVLFWHQHLGQPTFH 8
+W F C+ V +S + +L+ R F+ QH+ +P H
Sbjct: 10 LWAFACLSVSISRRSEKGKCMLVPRERRHFFVQHVSRPHIH 50
>Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical
protein T12G3.2c protein.
Length = 888
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 276 SAGKF*GIQYPHLLNTSKNASMRTVHKTYPLDLS 175
S ++ YPHLL T++ +++H +Y DLS
Sbjct: 397 SKNRYWAATYPHLLCTTRQKGRQSIHSSYQ-DLS 429
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical
protein T12G3.2b protein.
Length = 912
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 276 SAGKF*GIQYPHLLNTSKNASMRTVHKTYPLDLS 175
S ++ YPHLL T++ +++H +Y DLS
Sbjct: 397 SKNRYWAATYPHLLCTTRQKGRQSIHSSYQ-DLS 429
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical
protein T12G3.2a protein.
Length = 928
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 276 SAGKF*GIQYPHLLNTSKNASMRTVHKTYPLDLS 175
S ++ YPHLL T++ +++H +Y DLS
Sbjct: 397 SKNRYWAATYPHLLCTTRQKGRQSIHSSYQ-DLS 429
>U23522-1|AAC46819.3| 962|Caenorhabditis elegans Hypothetical protein
W06B4.3 protein.
Length = 962
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 211 ANCSQNISSRFK*LHSFDHLEVRDLLEIWMFGCMVVFLSYHD-SLLEEVLIDRNTVL 44
++C++ IS R +HS H R+ LEI M+ FLS + ++ ++ID VL
Sbjct: 843 SHCARPISGRAFNVHSCRHFFHRECLEI----AMISFLSQEEVEKMKTLIIDEERVL 895
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 9 WKVGCPRC*CQNKTVFLSMSTSSRRES 89
W GC C C+NK F S+ + + S
Sbjct: 534 WSDGCRHCFCENKQEFCSLISCPTKPS 560
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 9 WKVGCPRC*CQNKTVFLSMSTSSRRES 89
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 9 WKVGCPRC*CQNKTVFLSMSTSSRRES 89
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 9 WKVGCPRC*CQNKTVFLSMSTSSRRES 89
W GC C C+NK F S+ + + S
Sbjct: 534 WSDGCRHCFCENKQEFCSLISCPTKPS 560
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 9 WKVGCPRC*CQNKTVFLSMSTSSRRES 89
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 9 WKVGCPRC*CQNKTVFLSMSTSSRRES 89
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 9 WKVGCPRC*CQNKTVFLSMSTSSRRES 89
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 9 WKVGCPRC*CQNKTVFLSMSTSSRRES 89
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>Z93374-6|CAB07559.1| 108|Caenorhabditis elegans Hypothetical
protein C06C6.8 protein.
Length = 108
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 318 RTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADV 443
R + V R A RPD T+ + PPA P ++ +V
Sbjct: 39 RVDLVPRNAPVRPDPVKETSAQTCPTAQTPPAKTPMERSGNV 80
>Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical
protein W04D2.1b protein.
Length = 894
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 346 LAGLMLQHEQLKIDQLIGAHHQLE 417
LA L++ HE +I++L+ AH Q +
Sbjct: 537 LADLVIVHEMREIEELVNAHDQFK 560
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 346 LAGLMLQHEQLKIDQLIGAHHQLE 417
LA L++ HE +I++L+ AH Q +
Sbjct: 563 LADLVIVHEMREIEELVNAHDQFK 586
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 339 GAVGRPDAPARTAEDRSAYRRAPP 410
G+V R PAR A D Y+ APP
Sbjct: 76 GSVFRARRPARGAYDEGDYKEAPP 99
>Z68749-4|CAA92959.2| 179|Caenorhabditis elegans Hypothetical
protein F56H11.2 protein.
Length = 179
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 139 LLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFWHQHLGQP 17
L+ + +FG ++ F++Y+ S + +DR TV H+ P
Sbjct: 65 LVGVMIFGAVINFVNYYKSKKRQKELDRMTVESLLAHMALP 105
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +3
Query: 294 PATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSAD 461
PA + + + + A G D P+ A + +A AP D A +GP +++
Sbjct: 451 PADVATTAPETSSAQSAAGSYDVPSEPASEVTAPIVESATEAPSDSAAPIGPAASE 506
>AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical
protein R11G11.14 protein.
Length = 404
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 56 KHGFVLASTSWTTNFP 9
+HG + AST WT N P
Sbjct: 79 QHGLLCASTDWTMNLP 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,601,140
Number of Sequences: 27780
Number of extensions: 208952
Number of successful extensions: 745
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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