Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C17
         (325 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   0.92 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   1.2  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   2.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   2.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   3.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   3.7  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    20   6.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   6.5  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              20   8.6  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   8.6  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 141 WLPHDIFYHRKLRLILELYMWVRT 70
           W+ HD +    LR++L+ ++ + T
Sbjct: 803 WIAHDRYLPNSLRILLKRFLDITT 826


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 67  RP*TRNPAALPTVQSSLHLSL 5
           RP  +NP A+P   SSL L L
Sbjct: 395 RPFLKNPDAIPAFLSSLFLWL 415


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +1

Query: 271 PGPHHH 288
           PGPHHH
Sbjct: 412 PGPHHH 417



 Score = 20.2 bits (40), Expect = 6.5
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 161 PGQLPLPGSKTCCQVPIGVFR 223
           P  + +  + TC  VP G+F+
Sbjct: 125 PTNVVVKNNGTCLYVPPGIFK 145


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = -3

Query: 164 QAVLPLCYGCLTIFSTTEN 108
           Q V PL  GCL  FSTT N
Sbjct: 295 QWVYPLT-GCLYYFSTTIN 312


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 134 GNHSIVVGRPGQLPLPGSKTCCQV 205
           G +  V   P   PL GSK  C +
Sbjct: 89  GQNKAVAPYPPNHPLSGSKHLCSI 112


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 134 GNHSIVVGRPGQLPLPGSKTCCQV 205
           G +  V   P   PL GSK  C +
Sbjct: 89  GQNKAVAPYPPNHPLSGSKHLCSI 112


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 182 LGAVAGQAVLPLCYGCL 132
           LG  +  A LP+ + CL
Sbjct: 358 LGTASSAATLPITFRCL 374


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 270 SWTTSSLNNSQD 305
           SW+  SLNN+ D
Sbjct: 464 SWSDESLNNALD 475


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = +3

Query: 162 LASYRSQVQKPVAKYQ*VCSG 224
           + +YR++VQK +++ + +  G
Sbjct: 101 IPAYRAEVQKAISECKGIAKG 121


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 140 GCLTIFSTTEN 108
           GCL  FSTT N
Sbjct: 314 GCLYYFSTTIN 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,412
Number of Sequences: 438
Number of extensions: 2265
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)