Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C16
(298 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.05c |sam1||S-adenosylmethionine synthetase |Schizosacch... 123 6e-30
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 0.78
SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces po... 26 1.0
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 24 4.2
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 24 4.2
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 24 5.5
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 24 5.5
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 24 5.5
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 24 5.5
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 24 5.5
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 23 7.3
SPAC3A11.13 ||SPAC3H5.02|prefoldin subunit 6|Schizosaccharomyces... 23 9.6
SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1 |Schizosacch... 23 9.6
SPAC922.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 23 9.6
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 23 9.6
SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|ch... 23 9.6
SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55 family|S... 23 9.6
>SPBC14F5.05c |sam1||S-adenosylmethionine synthetase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 382
Score = 123 bits (296), Expect = 6e-30
Identities = 57/95 (60%), Positives = 66/95 (69%)
Frame = +3
Query: 12 RRSEVFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLQHSDKIELETLRDEIKEKVI 191
RR W RPD+KTQVT EY GA +P+RV T+VVS QH+D I E LR EI EK+I
Sbjct: 155 RRDGSLPWLRPDTKTQVTIEYEEENGAVIPRRVDTIVVSAQHADSISTEDLRSEILEKII 214
Query: 192 KEVIPAQYLDEKTVIHINPCGLFIIGGPQSDAGLT 296
K +PA LDEKTV HI P G F++GGPQ DAGLT
Sbjct: 215 KPTVPAHLLDEKTVYHIQPSGRFVVGGPQGDAGLT 249
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 0.78
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = -1
Query: 202 MTSLITFSLISSRNVSNSILSECCSDTTTV*TRWGTVAPPANTYSQVTCVLESGRAH-QN 26
++S +T L SS ++ S S+ S TT+ + + + P +T+S V+ +L S + +
Sbjct: 531 ISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIP-STFSSVSSILSSSTSSPSS 589
Query: 25 TSLRLS 8
TSL +S
Sbjct: 590 TSLSIS 595
>SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 26.2 bits (55), Expect = 1.0
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 247 GLMWITVFSSRYCAGMTSLITFSLISSRNVS-NSILSECCS 128
GL W+ FS+ + G+T + + L + VS N L+ C S
Sbjct: 407 GLFWVMGFSAIFGNGITQNVIWMLSDRKVVSKNHTLNHCSS 447
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 236 PHQPVRTLHHWWTSV*RWFD 295
P+ P + +HH+W V WFD
Sbjct: 584 PNGPPKYIHHFW--VHTWFD 601
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 24.2 bits (50), Expect = 4.2
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 140 RMLQRYNYGMNSLGHGSSTSKYVFASNLCFGIRS 39
R + Y+Y N L H + LCFG+R+
Sbjct: 302 RYVDHYSYLKNGLKHINGVDDGKEFQKLCFGLRT 335
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 23.8 bits (49), Expect = 5.5
Identities = 9/43 (20%), Positives = 22/43 (51%)
Frame = +3
Query: 144 KIELETLRDEIKEKVIKEVIPAQYLDEKTVIHINPCGLFIIGG 272
++ L DE+ EK++K + ++D ++ + + I+ G
Sbjct: 773 RMSLSFSDDEMAEKILKAIYVTYHMDSPDILFASAEAMSILAG 815
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 23.8 bits (49), Expect = 5.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -3
Query: 146 FVRMLQRYNYGMNSLGHGSSTSKYVFASNL 57
F++ LQ NY N G VF SN+
Sbjct: 72 FLKSLQTINYDYNENSLGPEPPTQVFVSNI 101
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 23.8 bits (49), Expect = 5.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 286 ASD*GPPMMKSPHGLMWITVFSSRYCAGMTSLI 188
A D G P++ + G + T+ RYCAG I
Sbjct: 103 AMDSGKPLVSNARGDVDGTIALLRYCAGWADKI 135
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 23.8 bits (49), Expect = 5.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 196 SLITFSLISSRNVSNSILSECCSDTTT 116
S +T LISS NS+ E +D+ T
Sbjct: 168 SFVTHDLISSSKDGNSLTHEFANDSVT 194
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 23.8 bits (49), Expect = 5.5
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 120 VVSLQHSDKIELETLRDEIKEKVIKEVIPAQ 212
+V++ S+K+EL+ LR+ EK I++V A+
Sbjct: 683 LVTITMSEKVELDLLRE---EKAIRQVQEAE 710
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 23.4 bits (48), Expect = 7.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 15 RSEVFWWARPDSK 53
R EVFWW++ K
Sbjct: 3579 RDEVFWWSKQQRK 3591
>SPAC3A11.13 ||SPAC3H5.02|prefoldin subunit 6|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 114
Score = 23.0 bits (47), Expect = 9.6
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 127 DTTTV*TRWGTVAPPANTYSQV--TCVLES-GRAHQNTSLRLSLV 2
+ TTV VAP +N Y Q+ T V +S A N RL +
Sbjct: 31 ENTTVLNELEKVAPDSNIYKQIGPTLVKQSHEEAKTNVKTRLDFI 75
>SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 99 PQRVHTVVVSLQHSDK-IELETLRDEIKEKVIKEVIPAQY 215
P+ H ++ ++ + D+ +E+E LR K I ++IP QY
Sbjct: 561 PRFHHQLMPNIVYIDETVEIEVLRALEKFGHIVDLIPVQY 600
>SPAC922.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 117
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 113 MNSLGHGSSTSKYVFASNLCFG 48
+N+L G+ + YV++SN C G
Sbjct: 68 INALTDGAVCTVYVYSSNNCTG 89
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 52 KHRLLANTYLLVELPCPSEFI 114
K RLL + + L LPC F+
Sbjct: 27 KFRLLESQFALYSLPCQLRFV 47
>SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 505
Score = 23.0 bits (47), Expect = 9.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -3
Query: 137 MLQRYNYGMNSLGHGSSTSKYVFASNLCFGIRSRPPEHFASSQP 6
++ R +Y + G G Y+ C+G+ + E+FAS P
Sbjct: 283 VISRGDYSAVNPGLGDG---YMIIGATCYGVSNTLEEYFASKLP 323
>SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 361
Score = 23.0 bits (47), Expect = 9.6
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 235 ITVFSSRYCAGMTSLITFSLISSRNVSNSILSE 137
I+ F RY + S+I +RN ILSE
Sbjct: 154 ISPFEERYFVATSGDGVLSVIDARNFKKPILSE 186
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,169,350
Number of Sequences: 5004
Number of extensions: 20285
Number of successful extensions: 65
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 73880280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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