Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C16
         (298 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    28   0.065
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   0.80 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   4.2  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    21   7.4  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 0.065
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = -1

Query: 181 SLISSRNVSNSILSECCSDTTTV*TRWGTVAPPANTYSQVTCVLESGRAHQNTS 20
           S  SS  +SNS L   CS ++   T +GT++ P+N  S     L    +H  TS
Sbjct: 185 SASSSNQLSNSSL---CSASSGSSTYYGTMSEPSNASSPAPSHLSDHSSHGGTS 235


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 296 SQTSVRLRSTNDEESARVDVDNSFFIEILCR 204
           S ++V LR+   +     D+D+S F+E++ R
Sbjct: 140 STSAVSLRNVEVQAQPEEDIDHSSFVEVVRR 170


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 21  EVFWWARPDSKTQVT 65
           EV+ W +PD K Q T
Sbjct: 90  EVYQWNKPDLKLQYT 104


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = -1

Query: 55  VLESGRAHQNTSLR 14
           +L++GR+HQN +++
Sbjct: 154 LLDAGRSHQNRTMK 167


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 315,951
Number of Sequences: 2352
Number of extensions: 5369
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 18688617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)