Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C15
         (183 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   1.8  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    21   1.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   3.1  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    18   9.5  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    18   9.5  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 85  SDINQNIQFKSLLNIIY*HIYNSELYETKTR 177
           SD+    Q KS L+++   +  SEL+  K++
Sbjct: 174 SDVESYKQIKSDLDVLRQSVEKSELWVYKSK 204


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 85  SDINQNIQFKSLLNIIY*HIYNSELYETKTR 177
           SD+    Q KS L+++   +  SEL+  K++
Sbjct: 142 SDVESYKQIKSDLDVLRQSVEKSELWVYKSK 172


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 33  LEKVYKHNVFSLIFTNSK*YQSK 101
           LEKV KH++  ++  + +  Q K
Sbjct: 357 LEKVIKHDILRMLIIDLRKKQLK 379


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 58  TLCLYTFSSA 29
           ++CL TF+SA
Sbjct: 282 SICLVTFASA 291


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -2

Query: 47  IYFFKCSNI 21
           I +F+CSN+
Sbjct: 441 ILYFRCSNL 449


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,938
Number of Sequences: 438
Number of extensions: 592
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used:  2576460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)