Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C14
(296 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0674 - 31090767-31091087 34 0.023
03_04_0095 + 17266595-17266741,17267235-17267807 27 2.6
10_08_0928 + 21617977-21618157,21618260-21618378,21618653-216187... 26 4.6
07_03_0333 - 16888606-16888740,16889463-16889570,16889691-168897... 26 4.6
06_03_1295 + 29100322-29100391,29100774-29100781,29101571-291016... 26 4.6
05_05_0384 - 24557190-24557393,24557481-24557597,24557712-24558440 26 4.6
04_03_0430 + 15836839-15836973,15837267-15837359,15838975-15839139 26 4.6
04_03_0420 + 15703479-15703613,15703907-15703999,15705615-15705779 26 4.6
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917... 26 4.6
06_03_0244 + 18637406-18637511,18637576-18638123 26 6.0
04_04_1454 - 33715782-33715797,33715887-33715918,33716582-33716920 26 6.0
01_01_0359 + 2829325-2832076,2832223-2832593,2833335-2833695,283... 26 6.0
12_02_0089 + 13488932-13489915 25 8.0
10_08_0748 - 20277623-20277736,20277956-20279425 25 8.0
08_01_0984 - 9952630-9954132 25 8.0
07_03_0625 + 20054380-20054434,20054819-20054853,20055387-20055941 25 8.0
07_03_0216 + 15286968-15286970,15287068-15287213,15288333-152883... 25 8.0
07_01_0723 + 5524158-5525009 25 8.0
07_01_0659 + 4946937-4946990,4947579-4947698,4947820-4947918,494... 25 8.0
04_03_0719 + 19006730-19007440 25 8.0
03_05_1032 - 29861859-29862011,29862347-29862470,29862557-298627... 25 8.0
03_05_0929 - 28898627-28898728,28898826-28898906,28899419-288995... 25 8.0
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 25 8.0
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 25 8.0
>01_06_0674 - 31090767-31091087
Length = 106
Score = 33.9 bits (74), Expect = 0.023
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -3
Query: 282 GGSAIVWQGEMQVLWLEPHIWLEQPTPPASALCRLHACS 166
GG+A VW Q L P I +P PP +A+ +LHAC+
Sbjct: 41 GGAAPVWMCTHQ-RELRPAISRRRPVPPGAAVMQLHACT 78
>03_04_0095 + 17266595-17266741,17267235-17267807
Length = 239
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 71 GQGKIHKKSQTGGMVCLSLPVGGTPRRIASVVEQACSRQRALAG 202
G+ H++ GG + +GG PR +A +C+RQ L G
Sbjct: 157 GRRHPHRREAHGGSGS-GVFIGGGPREVAQGETSSCARQHLLDG 199
>10_08_0928 +
21617977-21618157,21618260-21618378,21618653-21618774,
21618853-21619049,21619350-21619603,21619779-21619880,
21619976-21620404,21620611-21621369,21621586-21621771
Length = 782
Score = 26.2 bits (55), Expect = 4.6
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 77 GKIHKKSQTG--GMVCLSLPVGGTPRRIASVVEQA 175
G++ KS T GMV L L G P +A +VEQA
Sbjct: 605 GQVSTKSDTYALGMVLLQLLTGKPPVGLADLVEQA 639
>07_03_0333 -
16888606-16888740,16889463-16889570,16889691-16889790,
16890473-16890560,16890637-16893253
Length = 1015
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 109 YGLSISTCRWNTSANRFCSGASVQSTES 192
YG++ TC +NT N F S +V+ E+
Sbjct: 294 YGVAADTCTFNTLINIFGSCGNVKEAEA 321
>06_03_1295 +
29100322-29100391,29100774-29100781,29101571-29101676,
29101994-29102264,29102331-29103188,29103280-29103388
Length = 473
Score = 26.2 bits (55), Expect = 4.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 206 VGCSSQMWGSNQSTCISPCQTIAEPPITSL 295
V CS W +NQ+ I PC + +S+
Sbjct: 434 VDCSMYSWKNNQNEIIKPCHFLRHATCSSV 463
>05_05_0384 - 24557190-24557393,24557481-24557597,24557712-24558440
Length = 349
Score = 26.2 bits (55), Expect = 4.6
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -3
Query: 291 DVIGGSAIVWQGEMQVLWLEPHIWLEQPTPPASALCRLHACSTTEAIRRGVPP 133
DV GG G L + P + P P A+ C LH+ S+ A PP
Sbjct: 138 DVAGGG-----GHYAPLLVRPALPPLPPPPAAAPFCHLHSSSSAAAGHNVAPP 185
>04_03_0430 + 15836839-15836973,15837267-15837359,15838975-15839139
Length = 130
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 73 TGENSQEIANGRYGLSISTCRWNT 144
T SQEI G + S CRW+T
Sbjct: 3 TAARSQEIKQGLWKYSDERCRWHT 26
>04_03_0420 + 15703479-15703613,15703907-15703999,15705615-15705779
Length = 130
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 73 TGENSQEIANGRYGLSISTCRWNT 144
T SQEI G + S CRW+T
Sbjct: 3 TAARSQEIKQGLWKYSDERCRWHT 26
>03_05_0697 +
26888791-26888861,26890468-26890579,26891561-26891757,
26892215-26892266,26893530-26893795,26894007-26894229,
26895154-26895327,26895408-26895485,26895566-26895817,
26896138-26898204,26899477-26901322,26901474-26901574,
26902179-26902535,26902681-26902799,26903558-26903559,
26903630-26903662,26903709-26903841,26904285-26904537,
26905688-26905912,26906401-26906466,26907373-26907471,
26908528-26908545,26908546-26908893,26909878-26910354
Length = 2522
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 104 GGMVCLSLPVGGTPRRIASVVEQACSRQRAL 196
GG V +S+ GTP R+AS+ + R R L
Sbjct: 651 GGQVVISVSADGTP-RLASITSELPGRSRNL 680
>06_03_0244 + 18637406-18637511,18637576-18638123
Length = 217
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 183 RLHACSTTEAIRRGVPPTGRDRQTIPP 103
RL A +T A RR PP D + +PP
Sbjct: 72 RLGARRSTAAHRRPSPPAAADHRCLPP 98
>04_04_1454 - 33715782-33715797,33715887-33715918,33716582-33716920
Length = 128
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 210 PTPPASALCRLHACSTTEAIRRGVPPTGRDRQTIPPVCDFL 88
P+P ++ R+ A T A R VPP R +Q PP + L
Sbjct: 45 PSPASARGVRIIAAGETSAAARAVPPPPR-QQGEPPRAEAL 84
>01_01_0359 + 2829325-2832076,2832223-2832593,2833335-2833695,
2833799-2833868,2834021-2834108,2834325-2834580,
2834758-2834883,2835217-2835425
Length = 1410
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 91 EIANGRYGLSISTCRWNTSANRFCSGASV 177
E R G S ++ WN+SAN FCS V
Sbjct: 1036 EYFKSRVG-SAASWSWNSSANSFCSWEGV 1063
>12_02_0089 + 13488932-13489915
Length = 327
Score = 25.4 bits (53), Expect = 8.0
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 188 RALAGGVGCSSQMWGSNQSTCISPCQ 265
+ L GG+GC + W ++ C+ C+
Sbjct: 33 KRLHGGIGCGEEEW-LREARCLQACR 57
>10_08_0748 - 20277623-20277736,20277956-20279425
Length = 527
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 140 TPRRIASVVEQACSRQRALAGGVGCSSQMWGSNQ 241
TP R ++A + R +A G+G SS +W S +
Sbjct: 92 TPVRPMRSADEAPTGLRHIAFGIGASSALWKSRK 125
>08_01_0984 - 9952630-9954132
Length = 500
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 170 QACSRQRALAGGVGCSSQMWGSNQSTCISPCQTIAEPPITSL 295
+ C RQRA + +M S QS+C+ + P +TS+
Sbjct: 126 ELCRRQRAKTHSILSDPRMVASMQSSCVDKVRDGLIPFLTSV 167
>07_03_0625 + 20054380-20054434,20054819-20054853,20055387-20055941
Length = 214
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 119 LSLPVGGTPRRIASVVEQACSRQRALAGG 205
+S+P G +PR+IA++ + + S +GG
Sbjct: 95 VSVPCGASPRKIAALRKSSSSLSTTSSGG 123
>07_03_0216 +
15286968-15286970,15287068-15287213,15288333-15288335,
15288514-15288697,15289772-15289824,15290118-15290206,
15291270-15291506,15293494-15293687,15293774-15293834,
15293905-15294022,15294093-15294174,15295212-15295337,
15295435-15295530,15295945-15296099,15296706-15296802,
15296926-15297003,15297085-15297192
Length = 609
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 188 RALAGGVGCSSQMWGSN 238
R AG GCS +MW +N
Sbjct: 232 RKSAGNKGCSKEMWDNN 248
>07_01_0723 + 5524158-5525009
Length = 283
Score = 25.4 bits (53), Expect = 8.0
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 94 IANGRYGLSISTCRWNTSANRFCSG 168
+A+G G ++ C W ++ FC G
Sbjct: 169 LAHGAIGAFLTHCGWGSTVESFCFG 193
>07_01_0659 +
4946937-4946990,4947579-4947698,4947820-4947918,
4948038-4948175,4948268-4948402,4948501-4948609,
4948735-4948976,4949061-4949180,4949272-4949391,
4949477-4949599,4949708-4949812,4949896-4950040,
4950337-4950501,4950621-4950859,4950939-4950971,
4951082-4951163,4951314-4951474,4951566-4951751,
4951877-4952059,4952166-4952347,4952461-4952557
Length = 945
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 59 TFAEGQGKIHKKSQTGGMVCLSLPVGGT--PRRIASVVEQACSR 184
T+ +G+GK+H+ S+ L+L T RR+ +V+++ R
Sbjct: 402 TYIDGEGKMHRVSKGAPEQILNLAHNKTEIERRVRAVIDKFAER 445
>04_03_0719 + 19006730-19007440
Length = 236
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 104 GGMVCLSLPVGGTPRRIASVVEQACSRQRALAGGV 208
G + L + +GG+PRR+ S +++ S + GV
Sbjct: 87 GSHLLLGVRLGGSPRRLVSSLQRDGSSSSTASAGV 121
>03_05_1032 -
29861859-29862011,29862347-29862470,29862557-29862759,
29863081-29863199,29863489-29863623,29863695-29863950,
29864749-29864880,29865001-29865222
Length = 447
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -3
Query: 225 IWLEQPTPPASALCRLHACSTTEAIRRGVP 136
+W + P P +CRL CS E P
Sbjct: 121 LWCDCPFWPDDGMCRLRDCSVCECPENEFP 150
>03_05_0929 -
28898627-28898728,28898826-28898906,28899419-28899523,
28899598-28899670,28900235-28900287,28900987-28901307
Length = 244
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -3
Query: 210 PTPPASALCRLHACSTTEAIRRGVPPTGRD 121
P PP +L RLH + +R PP D
Sbjct: 2 PPPPPPSLARLHQRLSLSLLRGRSPPAAAD 31
>03_03_0246 +
15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 276 SAIVWQGEMQVLWLEPHIWLEQPTPPASAL 187
SA V G W +P +E+P PPAS L
Sbjct: 97 SAPVRSGAPTAGWTKPAPAVEKPLPPASVL 126
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 195 SALCRLHACSTTEAIRRGVPPTGRD 121
+A+ R A TE + RGV P+G D
Sbjct: 52 AAMAREQALLLTEIVNRGVEPSGPD 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,504,666
Number of Sequences: 37544
Number of extensions: 177735
Number of successful extensions: 598
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 327448548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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