Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C14
(296 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h... 30 0.60
AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington d... 30 0.60
AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington d... 30 0.60
AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA... 30 0.60
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 28 1.8
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB... 27 5.6
AY052042-1|AAK93466.1| 1193|Drosophila melanogaster LP05220p pro... 26 7.4
AE014134-368|AAF51283.2| 1193|Drosophila melanogaster CG10882-PA... 26 7.4
X03414-1|CAA27148.1| 466|Drosophila melanogaster Kr polypeptide... 26 9.7
AY058738-1|AAL13967.1| 778|Drosophila melanogaster LP03571p pro... 26 9.7
AE014296-921|ABC66129.1| 158|Drosophila melanogaster CG34047-PA... 26 9.7
AE014134-1502|AAF52672.2| 778|Drosophila melanogaster CG13397-P... 26 9.7
>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
homolog protein.
Length = 3584
Score = 29.9 bits (64), Expect = 0.60
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 231 PHIWLEQPTPPASALCRL--HACSTTEAIRRGVPPTG 127
PHI QPTP A C L ++TEA + PPTG
Sbjct: 2596 PHINYMQPTPLARVSCALLMSRVASTEATKCRNPPTG 2632
>AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 29.9 bits (64), Expect = 0.60
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 231 PHIWLEQPTPPASALCRL--HACSTTEAIRRGVPPTG 127
PHI QPTP A C L ++TEA + PPTG
Sbjct: 2595 PHINYMQPTPLARVSCALLMSRVASTEATKCRNPPTG 2631
>AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 29.9 bits (64), Expect = 0.60
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 231 PHIWLEQPTPPASALCRL--HACSTTEAIRRGVPPTG 127
PHI QPTP A C L ++TEA + PPTG
Sbjct: 2595 PHINYMQPTPLARVSCALLMSRVASTEATKCRNPPTG 2631
>AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA
protein.
Length = 3583
Score = 29.9 bits (64), Expect = 0.60
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 231 PHIWLEQPTPPASALCRL--HACSTTEAIRRGVPPTG 127
PHI QPTP A C L ++TEA + PPTG
Sbjct: 2595 PHINYMQPTPLARVSCALLMSRVASTEATKCRNPPTG 2631
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 122 SLPVGGTPRRIASVVEQACSRQRALAGGVGCSSQMWGSNQSTCISPCQTIAEPP 283
+L VG P R E C + + G GC + + G + CI+ C + P
Sbjct: 1605 NLQVGCQPERTVPEEEDKCKSDQDCSRGYGCQASVNGIKE--CINLCSNVVCGP 1656
>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
isoform B protein.
Length = 1740
Score = 26.6 bits (56), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 131 VGGTPRRIASVVEQACSRQRALAGGVGCSSQMWGSNQSTCISPCQ 265
VG T IA A Q A+ GVG SS S++ SPC+
Sbjct: 145 VGCTAATIAGGSFSANGGQAAVGVGVGSSSSCGSSSERDTKSPCR 189
>AY052042-1|AAK93466.1| 1193|Drosophila melanogaster LP05220p
protein.
Length = 1193
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 95 SQTGGMVCLSLPVGGTPRRIASVVEQACSRQRALAG 202
+Q G V +LP TP+ +AS + Q LAG
Sbjct: 142 TQAGSYVNGALPPSSTPQSVASGINQMSLNSATLAG 177
>AE014134-368|AAF51283.2| 1193|Drosophila melanogaster CG10882-PA
protein.
Length = 1193
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 95 SQTGGMVCLSLPVGGTPRRIASVVEQACSRQRALAG 202
+Q G V +LP TP+ +AS + Q LAG
Sbjct: 142 TQAGSYVNGALPPSSTPQSVASGINQMSLNSATLAG 177
>X03414-1|CAA27148.1| 466|Drosophila melanogaster Kr polypeptide
protein.
Length = 466
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 59 TFAEGQGKIHKKSQTGGMVCLSLP 130
TF G +H+KS T ++CLS P
Sbjct: 439 TFVGFSGCLHRKSLTYPVICLSKP 462
>AY058738-1|AAL13967.1| 778|Drosophila melanogaster LP03571p
protein.
Length = 778
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 133 RWNTSANRFCSGASVQSTES 192
RWN +R+C G V+ TE+
Sbjct: 286 RWNQFPDRYCCGLFVEPTEN 305
>AE014296-921|ABC66129.1| 158|Drosophila melanogaster CG34047-PA
protein.
Length = 158
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +1
Query: 7 GGDHTHYSTSSIRGFFIHFR*RTGENSQEIANGRYGLSISTCRW 138
GG T + S + R E+ + G++G+ S CRW
Sbjct: 86 GGQTTAHGAHSTHRSLNALKTRHNESDRRFELGQWGIPSSLCRW 129
>AE014134-1502|AAF52672.2| 778|Drosophila melanogaster CG13397-PA
protein.
Length = 778
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 133 RWNTSANRFCSGASVQSTES 192
RWN +R+C G V+ TE+
Sbjct: 286 RWNQFPDRYCCGLFVEPTEN 305
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,323,582
Number of Sequences: 53049
Number of extensions: 266703
Number of successful extensions: 890
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 527894775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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