Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C13
(263 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 29 0.34
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 29 0.34
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 29 0.34
M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein ( C.ele... 29 0.34
Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical pr... 28 0.79
Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical pr... 27 2.4
CU457741-5|CAM36346.1| 113|Caenorhabditis elegans Hypothetical ... 26 4.2
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ... 26 4.2
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 26 4.2
AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical... 26 4.2
Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 25 5.6
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 25 5.6
U32305-6|AAV58892.1| 411|Caenorhabditis elegans Hypothetical pr... 25 5.6
U32305-5|AAK18855.2| 501|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z68119-4|CAA92195.1| 271|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF016446-5|AAC24163.1| 329|Caenorhabditis elegans Serpentine re... 25 9.8
AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine re... 25 9.8
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 41 PAVTRALLSATNKMSLDETVIDDGEFNMDELITFNRPHSDHDYQVVKNTD 190
P+V R +L N D D FN++ LI+ N + + Q+ KN D
Sbjct: 520 PSVYRLMLQCWNWSPSDRPRFRDIHFNLENLISSNSLNDEVQKQLKKNND 569
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 41 PAVTRALLSATNKMSLDETVIDDGEFNMDELITFNRPHSDHDYQVVKNTD 190
P+V R +L N D D FN++ LI+ N + + Q+ KN D
Sbjct: 525 PSVYRLMLQCWNWSPSDRPRFRDIHFNLENLISSNSLNDEVQKQLKKNND 574
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 41 PAVTRALLSATNKMSLDETVIDDGEFNMDELITFNRPHSDHDYQVVKNTD 190
P+V R +L N D D FN++ LI+ N + + Q+ KN D
Sbjct: 535 PSVYRLMLQCWNWSPSDRPRFRDIHFNLENLISSNSLNDEVQKQLKKNND 584
>M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein (
C.elegans DNA homologousto the v-abl oncogene. ).
Length = 552
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 41 PAVTRALLSATNKMSLDETVIDDGEFNMDELITFNRPHSDHDYQVVKNTD 190
P+V R +L N D D FN++ LI+ N + + Q+ KN D
Sbjct: 386 PSVYRLMLQCWNWSPSDRPRFRDIHFNLENLISSNSLNDEVQKQLKKNND 435
>Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical
protein K09E4.4 protein.
Length = 715
Score = 28.3 bits (60), Expect = 0.79
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 151 WTVERDQFVHIEFAVVYYGFVERHF 77
W +E D F H EF++ + VER F
Sbjct: 686 WILEHDDFNHTEFSISVFRDVERPF 710
>Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical
protein D2005.4 protein.
Length = 1188
Score = 27.5 bits (58), Expect = 1.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 119 NMDELITFNRPHSDHDYQVVKNTDAPYKVLPNGYVE*PIDEDWPPNL 259
N L + SDH Q V T Y+ + E PIDE+W NL
Sbjct: 767 NYCNLDVIEKTVSDHIPQEVVRTQL-YEAMKKYAAEMPIDENWKKNL 812
>Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical
protein F21C3.2 protein.
Length = 813
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 35 NSPAVTRALLSATNKMSLDETVIDDGEFNMDELITFNRPHSDHDYQ 172
N PA+TRA+ + S DE G+ ++ +++ F+ P YQ
Sbjct: 346 NKPAITRAVGAQGKGYSEDEINTMLGQTDIAQVLAFSAPQRGCPYQ 391
>CU457741-5|CAM36346.1| 113|Caenorhabditis elegans Hypothetical
protein C42C1.4b protein.
Length = 113
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 86 LDETVIDDGEFNMDELITFNRPHSDHDYQVVKNTDAPYKVLPN 214
LDE DGEF +T + HS + + D+ + + P+
Sbjct: 41 LDEQFAVDGEFGSVSNLTESTAHSPDSHSLTYKLDSAFVIQPH 83
>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
protein C42C1.4a protein.
Length = 1259
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 86 LDETVIDDGEFNMDELITFNRPHSDHDYQVVKNTDAPYKVLPN 214
LDE DGEF +T + HS + + D+ + + P+
Sbjct: 41 LDEQFAVDGEFGSVSNLTESTAHSPDSHSLTYKLDSAFVIQPH 83
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = +2
Query: 11 HEADQVHVNSPAVTRALLSATNKMSLDETVIDDGEFNMDELITFNRPHSDHDYQVVKNTD 190
H+A + N R ++ T S+D T++D + ++ L T P S D + +
Sbjct: 383 HDAVMDYKNGRYSRRPVIEMTIPSSVDRTIVDSADGHVVLLFTQYTPFSPKDGEWTEEKK 442
Query: 191 APY 199
Y
Sbjct: 443 TEY 445
>AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical
protein F32D1.7 protein.
Length = 301
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 7 SARG*PGPRQLAGGHESPPLGHQQNVA 87
S G P PR GH++P LG+Q + +
Sbjct: 183 STSGPPPPRPPPAGHQNPFLGNQPSTS 209
>Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical
protein W02A2.6 protein.
Length = 781
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +2
Query: 62 LSATNKMSLDETVIDDGEFNMDELITFNRPHSDHD 166
L N++++ + ++++ E E + FN +DHD
Sbjct: 706 LLPNNRLNIHKELLNEAEARYPEWVNFNEFTADHD 740
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 41 PAVTRALLSATNKMSLDETVIDDGEFNMDELITFNRPHSDHDYQVVKNTDAPYKVLPN 214
PAVT AL+ + + D V DD + DE+ + + S D + ++ + + LP+
Sbjct: 1129 PAVTPALVDSDGEEEADRIVFDDDD---DEIESVSAVSSQRDPEPLEVPERQVENLPS 1183
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 41 PAVTRALLSATNKMSLDETVIDDGEFNMDELITFNRPHSDHDYQVVKNTDAPYKVLPN 214
PAVT AL+ + + D V DD + DE+ + + S D + ++ + + LP+
Sbjct: 1129 PAVTPALVDSDGEEEADRIVFDDDD---DEIESVSAVSSQRDPEPLEVPERQVENLPS 1183
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/42 (23%), Positives = 19/42 (45%)
Frame = +2
Query: 95 TVIDDGEFNMDELITFNRPHSDHDYQVVKNTDAPYKVLPNGY 220
T ++G++ + + H +H YQ + P V NG+
Sbjct: 659 TTNENGQYQQQQSSEVKQEHQNHGYQQQQAQHPPASVASNGH 700
>U32305-6|AAV58892.1| 411|Caenorhabditis elegans Hypothetical
protein B0336.7b protein.
Length = 411
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 86 LDETVIDDGEFNMDELITFNRPHSDHDYQVVKNTDAPYKVLPNGYVE*PIDED 244
LDE V D N E RP + + + V + P ++ +G E PI E+
Sbjct: 271 LDEVVYVDEGGNSLEWHAVTRPGDNREVEAVHEKEDPPIMMYDGNFEDPITEE 323
>U32305-5|AAK18855.2| 501|Caenorhabditis elegans Hypothetical
protein B0336.7a protein.
Length = 501
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 86 LDETVIDDGEFNMDELITFNRPHSDHDYQVVKNTDAPYKVLPNGYVE*PIDED 244
LDE V D N E RP + + + V + P ++ +G E PI E+
Sbjct: 361 LDEVVYVDEGGNSLEWHAVTRPGDNREVEAVHEKEDPPIMMYDGNFEDPITEE 413
>Z68119-4|CAA92195.1| 271|Caenorhabditis elegans Hypothetical
protein T18D3.6 protein.
Length = 271
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 115 IQYGRTDHVQPSTFRS*LPSGQEH*CTVQSTTERL 219
+Q+ R +H QP F P G H + Q + E L
Sbjct: 77 LQHLRPEHFQPGGFFDPQPEGNYHPLSPQHSDEEL 111
>AF016446-5|AAC24163.1| 329|Caenorhabditis elegans Serpentine
receptor, class h protein22 protein.
Length = 329
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 205 YFVRCISVLDHLVIMIGMWTVERDQFVH 122
YF+RCISV D + ++ R Q H
Sbjct: 137 YFIRCISVFDTFLAILTSQDAYRFQEEH 164
>AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine
receptor, class h protein23 protein.
Length = 321
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 205 YFVRCISVLDHLVIMIGMWTVERDQFVH 122
YF RCIS+ D +++ R Q H
Sbjct: 137 YFTRCISIFDTFFVILTSHDAHRFQEEH 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,475,813
Number of Sequences: 27780
Number of extensions: 93889
Number of successful extensions: 240
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 12,740,198
effective HSP length: 66
effective length of database: 10,906,718
effective search space used: 229041078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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