Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C10
(369 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 4.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 4.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 4.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 4.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 4.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 8.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 8.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 8.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 8.1
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 20 8.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 8.1
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.0 bits (42), Expect = 4.6
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 77 AQARESSSRAAMGRQGIQKSPHGYEMEGEPLRWCISC*GH 196
A + E+S+ A + + K P + + RW SC G+
Sbjct: 34 ATSHEASAPAEGKFKTVSKVPGPFSLPIFGTRWIFSCIGY 73
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -1
Query: 90 SRACAPCEYPEV--YP 49
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -1
Query: 90 SRACAPCEYPEV--YP 49
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -1
Query: 90 SRACAPCEYPEV--YP 49
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 4.6
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +1
Query: 232 PNSALRKCV 258
PNSA+RKC+
Sbjct: 584 PNSAVRKCM 592
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 6.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1
Query: 139 TWVRDGRRTP 168
TW +DGR+ P
Sbjct: 366 TWYKDGRQLP 375
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 6.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1
Query: 139 TWVRDGRRTP 168
TW +DGR+ P
Sbjct: 366 TWYKDGRQLP 375
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.2 bits (40), Expect = 8.1
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 365 PNPATHTSS 339
PNP THT++
Sbjct: 432 PNPCTHTTT 440
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.2 bits (40), Expect = 8.1
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 365 PNPATHTSS 339
PNP THT++
Sbjct: 418 PNPCTHTTT 426
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.2 bits (40), Expect = 8.1
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 365 PNPATHTSS 339
PNP THT++
Sbjct: 452 PNPCTHTTT 460
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.2 bits (40), Expect = 8.1
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 365 PNPATHTSS 339
PNP THT++
Sbjct: 401 PNPCTHTTT 409
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 20.2 bits (40), Expect = 8.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 38 ANTIGSSCRIH 6
A +GS+CRIH
Sbjct: 435 AVNLGSACRIH 445
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 20.2 bits (40), Expect = 8.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 156 SISYPCGLF*IPCRPIAARD 97
++SY G + IP I++RD
Sbjct: 113 AVSYTSGFYHIPVIGISSRD 132
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,393
Number of Sequences: 438
Number of extensions: 2114
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8804355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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